Search Results

Mutant Information

Variant Information

Single base substitutions: 39

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	8401183	G-A	HET	INTERGENIC
SBS	Chr1	8401185	A-T	HET	INTERGENIC
SBS	Chr1	10486481	C-A	HET	INTERGENIC
SBS	Chr1	33779982	G-T	HET	INTERGENIC
SBS	Chr1	38220735	A-T	HOMO	INTERGENIC
SBS	Chr2	9805655	A-T	HET	INTERGENIC
SBS	Chr2	27088884	G-A	HET	INTERGENIC
SBS	Chr2	32179249	C-T	HET	INTERGENIC
SBS	Chr3	646241	T-G	HET	INTERGENIC
SBS	Chr3	1894873	G-A	HET	INTRON
SBS	Chr3	4018885	G-A	HET	INTERGENIC
SBS	Chr3	4018886	T-A	HET	INTERGENIC
SBS	Chr3	24338608	G-A	HOMO	INTERGENIC
SBS	Chr4	11642868	C-G	HET	UTR_3_PRIME
SBS	Chr4	14909605	G-A	HET	INTERGENIC
SBS	Chr4	15365769	C-A	HET	INTERGENIC
SBS	Chr5	912012	C-T	HET	INTERGENIC
SBS	Chr5	912019	T-A	HET	INTERGENIC
SBS	Chr5	10156217	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os05g17640
SBS	Chr5	11705248	A-G	HOMO	INTERGENIC
SBS	Chr6	3767443	G-A	HET	INTRON
SBS	Chr6	13307719	T-C	HOMO	INTERGENIC
SBS	Chr6	26518434	A-G	HET	INTERGENIC
SBS	Chr6	26845994	G-A	HOMO	INTERGENIC
SBS	Chr6	27250975	G-A	HOMO	INTERGENIC
SBS	Chr6	27250976	T-A	HOMO	INTERGENIC
SBS	Chr7	4129111	C-T	HET	INTERGENIC
SBS	Chr7	8652860	G-T	HET	INTERGENIC
SBS	Chr7	26622752	T-A	HOMO	INTERGENIC
SBS	Chr8	15621077	T-C	HOMO	INTRON
SBS	Chr8	15621486	C-T	HOMO	INTRON
SBS	Chr8	15904044	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os08g26140
SBS	Chr10	51024	T-A	HET	INTRON
SBS	Chr10	1926576	C-G	HET	SYNONYMOUS_CODING
SBS	Chr10	8070886	A-G	HET	UTR_5_PRIME
SBS	Chr10	12279754	G-A	HOMO	INTERGENIC
SBS	Chr10	12607834	G-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os10g24560
SBS	Chr12	5450403	C-T	HOMO	INTERGENIC
SBS	Chr12	5450404	C-T	HOMO	INTERGENIC

Deletions: 18

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	4298440	4298442	2
Deletion	Chr7	4551657	4551674	17	LOC_Os07g08810
Deletion	Chr6	5281833	5281834	1
Deletion	Chr3	9678995	9679009	14
Deletion	Chr10	10263151	10263153	2
Deletion	Chr5	11687960	11687962	2	LOC_Os05g19990
Deletion	Chr4	14163395	14163401	6
Deletion	Chr12	16090205	16090375	170
Deletion	Chr4	19250560	19250562	2
Deletion	Chr9	19370712	19370716	4
Deletion	Chr7	24121282	24121288	6
Deletion	Chr12	24472126	24472140	14
Deletion	Chr1	24497181	24497422	241
Deletion	Chr3	27716115	27716125	10
Deletion	Chr11	28722826	28722831	5
Deletion	Chr2	30874387	30874391	4	LOC_Os02g50560
Deletion	Chr3	32217867	32217868	1
Deletion	Chr3	36098869	36098880	11

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	5300443	5300443	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	10435187	10498349
Inversion	Chr4	10435199	10498359

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	18042969	Chr6	18884388	LOC_Os08g29430

Main menu