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Mutant Information |
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Mutant Name | FN-38 [Download] |
Generation | M2 |
Genus Species | Oryza Sativa |
Cultivar | Kitaake |
Alignment File (BAM File) | Download FN-38 Alignment File |
Seed Availability | Yes [Order Seeds] |
Mapping (Hover to Zoom-In) |
Variant Information |
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Single base substitutions: 6
Variant Type | Chromosome | Position | Change | Genotype | Effect | Gene Affected |
---|---|---|---|---|---|---|
SBS | Chr1 | 21915105 | T-C | Homo | INTERGENIC | |
SBS | Chr2 | 13455191 | C-T | Homo | SYNONYMOUS_CODING | |
SBS | Chr4 | 4579776 | G-A | HET | INTERGENIC | |
SBS | Chr4 | 7186772 | G-C | Homo | NON_SYNONYMOUS_CODING | LOC_Os04g13030 |
SBS | Chr5 | 22136622 | T-C | Homo | INTERGENIC | |
SBS | Chr11 | 24342201 | G-A | Homo | INTERGENIC |
Deletions: 1
Variant Type | Chromosome | Start | End | Size (bp) | Number of Genes |
---|---|---|---|---|---|
Deletion | Chr2 | 13490048 | 13490053 | 5 |
No Insertion
No Inversion
Translocations: 2
Variant Type | Chromosome | Position 1 | Chromosome | Position 2 | Number of Genes |
---|---|---|---|---|---|
Translocation | Chr5 | 1104990 | Chr4 | 34793648 | 2 |
Translocation | Chr5 | 1104991 | Chr4 | 34793630 | 2 |