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| Mutant Information |
|---|
| Mutant Name | FN-38 [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN-38 Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Mapping (Hover to Zoom-In) | 
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| Variant Information |
|---|
Single base substitutions: 6
| Variant Type | Chromosome | Position | Change | Genotype | Effect | Gene Affected |
|---|---|---|---|---|---|---|
| SBS | Chr1 | 21915105 | T-C | Homo | INTERGENIC | |
| SBS | Chr11 | 24342201 | G-A | Homo | INTERGENIC | |
| SBS | Chr2 | 13455191 | C-T | Homo | SYNONYMOUS_CODING | |
| SBS | Chr4 | 4579776 | G-A | HET | INTERGENIC | |
| SBS | Chr4 | 7186772 | G-C | Homo | NON_SYNONYMOUS_CODING | LOC_Os04g13030 |
| SBS | Chr5 | 22136622 | T-C | Homo | INTERGENIC |
Deletions: 1
| Variant Type | Chromosome | Start | End | Size (bp) | Number of Genes |
|---|---|---|---|---|---|
| Deletion | Chr2 | 13490048 | 13490053 | 5 |
No Insertion
No Inversion
Translocations: 2
| Variant Type | Chromosome | Position 1 | Chromosome | Position 2 | Number of Genes |
|---|---|---|---|---|---|
| Translocation | Chr5 | 1104990 | Chr4 | 34793648 | 2 |
| Translocation | Chr5 | 1104991 | Chr4 | 34793630 | 2 |