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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14807490	A-T	HOMO	INTERGENIC
SBS	Chr1	20256583	A-G	HET	INTRON
SBS	Chr2	29967274	C-T	HET	INTERGENIC
SBS	Chr2	30277452	G-T	HET	INTRON
SBS	Chr2	32052559	C-T	HET	INTERGENIC
SBS	Chr3	18213558	T-C	HET	INTRON
SBS	Chr3	29989262	T-A	HET	INTERGENIC
SBS	Chr4	2981012	C-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os04g05800
SBS	Chr4	7161159	T-C	HOMO	INTERGENIC
SBS	Chr4	35299971	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g59380
SBS	Chr5	4560781	T-C	HET	INTRON
SBS	Chr5	11164322	A-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os05g19220
SBS	Chr5	11878608	C-T	HET	INTERGENIC
SBS	Chr5	22234298	C-T	HOMO	INTERGENIC
SBS	Chr6	6478931	T-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g12090
SBS	Chr6	13181040	C-G	HET	INTRON
SBS	Chr6	19949404	G-A	HOMO	INTRON
SBS	Chr7	6894587	C-T	HET	INTERGENIC
SBS	Chr7	10682045	A-T	HET	INTRON
SBS	Chr7	17219101	A-C	HET	INTERGENIC
SBS	Chr8	13697729	C-G	HET	INTERGENIC
SBS	Chr10	15401101	A-T	HET	INTERGENIC
SBS	Chr11	7747765	A-G	HOMO	INTERGENIC
SBS	Chr11	11791891	G-T	HET	INTRON
SBS	Chr12	1076537	A-G	HET	INTERGENIC

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	1174935	1175005	70
Deletion	Chr12	3464562	3464570	8
Deletion	Chr3	3566343	3566357	14
Deletion	Chr12	4106918	4106939	21
Deletion	Chr8	11031626	11031628	2
Deletion	Chr5	12885657	12885660	3
Deletion	Chr4	15421866	15421867	1
Deletion	Chr7	15472721	15472732	11	LOC_Os07g26780
Deletion	Chr5	16558928	16558936	8
Deletion	Chr11	17558478	17558484	6
Deletion	Chr2	17579256	17579264	8	LOC_Os02g29550
Deletion	Chr5	19379420	19379422	2
Deletion	Chr1	19855264	19855269	5
Deletion	Chr6	20379226	20379236	10
Deletion	Chr11	23539679	23539681	2
Deletion	Chr5	23668908	23668912	4
Deletion	Chr3	28921589	28921595	6
Deletion	Chr2	28983232	28983250	18
Deletion	Chr3	34642948	34642949	1

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	9408987	9408987	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	16826416	16866786	2
Inversion	Chr3	16826945	16866926	2
Inversion	Chr10	17781483	18148550	2
Inversion	Chr10	17781504	18148588	2

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	24092451	Chr3	6551739

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