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Mutant Information

Variant Information

Single base substitutions: 20

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr2	29236557	C-G	HET	INTERGENIC
SBS	Chr4	23590517	C-T	HET	INTERGENIC
SBS	Chr4	27364897	A-G	HET	INTERGENIC
SBS	Chr4	28922831	C-T	HET	INTRON
SBS	Chr5	23402236	A-G	HET	INTERGENIC
SBS	Chr5	23823689	T-C	HET	INTERGENIC
SBS	Chr5	23823719	G-T	HET	INTERGENIC
SBS	Chr5	29886601	T-A	HET	INTRON
SBS	Chr6	2539570	C-G	HET	INTERGENIC
SBS	Chr6	2922270	A-G	HET	INTERGENIC
SBS	Chr6	3049990	G-T	HET	INTERGENIC
SBS	Chr6	7839519	A-G	HOMO	INTRON
SBS	Chr6	14188601	A-G	HOMO	INTERGENIC
SBS	Chr6	28930751	A-G	HOMO	INTERGENIC
SBS	Chr8	22072409	G-T	HOMO	INTERGENIC
SBS	Chr9	20018431	C-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os09g33910
SBS	Chr9	22592537	T-G	HOMO	INTERGENIC
SBS	Chr9	22592540	A-T	HOMO	INTERGENIC
SBS	Chr10	12335307	A-G	HET	INTRON
SBS	Chr12	21462263	C-T	HET	INTERGENIC

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	1386743	1386748	5
Deletion	Chr6	3035695	3035699	4	LOC_Os06g06450
Deletion	Chr1	3446956	3446998	42	LOC_Os01g07310
Deletion	Chr7	6656165	6656167	2
Deletion	Chr6	9091068	9091073	5	LOC_Os06g15990
Deletion	Chr11	11123201	11123211	10	LOC_Os11g19350
Deletion	Chr3	14896178	14896184	6	LOC_Os03g25990
Deletion	Chr1	16606911	16606912	1
Deletion	Chr10	18013272	18013914	642
Deletion	Chr1	18140211	18140212	1
Deletion	Chr1	18701697	18701705	8
Deletion	Chr5	19315655	19315659	4
Deletion	Chr5	20089295	20089299	4
Deletion	Chr1	21037060	21037070	10
Deletion	Chr9	22440825	22440836	11
Deletion	Chr3	23034246	23034261	15
Deletion	Chr6	23819547	23819550	3
Deletion	Chr6	24010841	24010865	24
Deletion	Chr6	27925271	27925276	5	LOC_Os06g46060
Deletion	Chr2	33691422	33691436	14

No Insertion

No Inversion

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	18013901	Chr7	23949765	2

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