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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	25611489	C-T	HOMO	INTERGENIC
SBS	Chr1	30990022	A-T	HET	INTERGENIC
SBS	Chr2	3598467	C-T	HOMO	INTERGENIC
SBS	Chr3	6340007	C-G	HET	INTRON
SBS	Chr3	22523883	A-T	HET	INTERGENIC
SBS	Chr4	34615990	A-T	HET	INTRON
SBS	Chr5	5798417	T-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os05g10640
SBS	Chr6	6181979	C-G	HET	INTERGENIC
SBS	Chr7	8163874	T-A	HET	INTRON
SBS	Chr7	8163875	C-A	HET	INTRON
SBS	Chr7	9342439	C-T	HOMO	INTERGENIC
SBS	Chr8	6409222	C-T	HET	INTERGENIC
SBS	Chr8	10262421	T-C	HET	INTRON
SBS	Chr8	10943844	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os08g17830
SBS	Chr9	2950350	G-A	HET	INTRON
SBS	Chr10	18433774	A-T	HET	INTERGENIC
SBS	Chr11	4525730	A-T	HOMO	INTRON
SBS	Chr11	23816458	G-A	HET	INTERGENIC
SBS	Chr12	8116420	G-A	HET	SYNONYMOUS_CODING
SBS	Chr12	18201695	G-C	HOMO	INTERGENIC
SBS	Chr12	19827498	G-A	HET	INTERGENIC
SBS	Chr12	21004172	G-C	HOMO	INTERGENIC

Deletions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	10454320	10454331	11
Deletion	Chr9	12689367	12689370	3
Deletion	Chr10	20296001	20448000	152000	25
Deletion	Chr10	20485001	20704000	219000	46
Deletion	Chr6	21243956	21243971	15
Deletion	Chr3	33214711	33214720	9	LOC_Os03g58300
Deletion	Chr1	33322723	33322737	14	LOC_Os01g57630
Deletion	Chr2	35161480	35161488	8	LOC_Os02g57380
Deletion	Chr1	38395122	38395123	1

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	34456208	34456208	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	4755899	5034135	LOC_Os11g09375
Inversion	Chr4	34843996	34952240
Inversion	Chr4	34844107	34952246

No Translocation

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