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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11559019	C-G	HOMO	INTERGENIC
SBS	Chr1	35588866	C-A	HET	INTERGENIC
SBS	Chr1	35588867	G-T	HET	INTERGENIC
SBS	Chr1	963605	T-A	HOMO	INTRON
SBS	Chr1	963606	C-A	HOMO	INTRON
SBS	Chr10	10093538	G-A	HET	INTRON
SBS	Chr10	21133339	G-T	HET	INTERGENIC
SBS	Chr10	4015204	T-G	HET	SYNONYMOUS_CODING
SBS	Chr12	24061906	G-A	HOMO	INTRON
SBS	Chr2	11531935	A-G	HOMO	INTERGENIC
SBS	Chr2	20537786	G-A	HOMO	INTRON
SBS	Chr2	20895932	T-C	HOMO	INTERGENIC
SBS	Chr2	31527534	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g51470
SBS	Chr2	7138409	C-A	HOMO	INTERGENIC
SBS	Chr3	15900978	A-T	HET	INTERGENIC
SBS	Chr3	17348376	G-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os03g30430
SBS	Chr3	20289323	C-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os03g36590
SBS	Chr3	30377951	C-G	HET	INTERGENIC
SBS	Chr3	6643886	C-T	HET	INTERGENIC
SBS	Chr3	6732395	A-T	HET	INTERGENIC
SBS	Chr5	14608006	G-A	HET	INTERGENIC
SBS	Chr5	20015551	A-T	HET	INTERGENIC
SBS	Chr5	26679461	C-T	HOMO	INTERGENIC
SBS	Chr5	26941968	A-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os05g46510
SBS	Chr5	430479	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os05g01700
SBS	Chr7	10449932	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g17700
SBS	Chr7	4130870	C-G	HET	INTERGENIC
SBS	Chr7	5514883	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os07g10270
SBS	Chr7	5589332	G-C	HET	INTERGENIC
SBS	Chr7	6419491	G-A	HET	INTERGENIC
SBS	Chr8	8303236	C-A	HET	INTRON

Deletions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	2260937	2260941	4
Deletion	Chr3	2630156	2630157	1
Deletion	Chr2	8898906	8898908	2
Deletion	Chr1	9004658	9004660	2	LOC_Os01g16000
Deletion	Chr4	11504940	11504944	4
Deletion	Chr10	14791915	14791924	9
Deletion	Chr3	21518821	21518822	1
Deletion	Chr10	22654546	22654548	2
Deletion	Chr5	27098050	27098060	10
Deletion	Chr7	27456069	27456078	9
Deletion	Chr6	31040616	31040617	1
Deletion	Chr2	34401464	34401468	4
Deletion	Chr1	42418110	42418114	4

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr12	1994696	1994698	3
Insertion	Chr3	29781945	29781949	5
Insertion	Chr8	12661233	12661233	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	8319652	8667860	2

No Translocation

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