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Mutant Information

Variant Information

Single base substitutions: 23

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	17988613	G-A	HET	INTERGENIC
SBS	Chr1	20416318	A-G	HET	INTERGENIC
SBS	Chr1	29545954	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g51390
SBS	Chr1	33186961	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g57420
SBS	Chr2	3959736	T-A	HET	INTERGENIC
SBS	Chr2	6193169	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g11940
SBS	Chr2	13134425	A-G	HET	SYNONYMOUS_CODING
SBS	Chr2	20429547	A-G	HOMO	INTRON
SBS	Chr4	13211517	A-C	HOMO	INTRON
SBS	Chr5	16225848	T-C	HOMO	INTERGENIC
SBS	Chr5	20722684	T-G	HET	INTRON
SBS	Chr5	27395172	C-A	HET	INTERGENIC
SBS	Chr5	27395174	G-A	HET	INTERGENIC
SBS	Chr6	353562	T-C	HET	INTERGENIC
SBS	Chr6	2299324	T-C	HET	INTERGENIC
SBS	Chr6	10279264	T-A	HET	INTERGENIC
SBS	Chr6	10714253	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os06g18850
SBS	Chr6	17200694	A-G	HOMO	INTERGENIC
SBS	Chr6	20260646	A-C	HET	INTERGENIC
SBS	Chr10	14236349	G-A	HET	INTERGENIC
SBS	Chr11	1724715	A-G	HET	SYNONYMOUS_CODING
SBS	Chr11	16650453	G-T	HET	INTRON
SBS	Chr11	16650454	G-T	HET	INTRON

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	1015750	1015781	31	LOC_Os04g02680
Deletion	Chr4	3074877	3074878	1
Deletion	Chr8	6437474	6437475	1
Deletion	Chr4	8567291	8567292	1
Deletion	Chr8	9293678	9293687	9
Deletion	Chr6	10714166	10726356	12190	3
Deletion	Chr12	12251010	12251024	14	LOC_Os12g21780
Deletion	Chr9	12762542	12762567	25
Deletion	Chr2	12823149	12823161	12
Deletion	Chr2	13067317	13067350	33
Deletion	Chr1	13284369	13284377	8
Deletion	Chr12	22176653	22176654	1
Deletion	Chr3	25507535	25507548	13	LOC_Os03g45170
Deletion	Chr1	25686879	25686922	43
Deletion	Chr2	28084001	28093000	9000	LOC_Os02g46090
Deletion	Chr2	28821001	28989000	168000	25
Deletion	Chr1	39697931	39697939	8

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	15780243	15780244	2
Insertion	Chr2	28162977	28162978	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	5517036	5904691

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	10714168	Chr2	27554886	2
Translocation	Chr6	10726342	Chr2	28989774

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