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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15161941	C-T	HET	INTERGENIC
SBS	Chr1	28881369	T-A	HOMO	INTERGENIC
SBS	Chr1	28881377	G-A	HOMO	INTERGENIC
SBS	Chr1	37702381	T-A	HET	INTERGENIC
SBS	Chr10	6328978	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr11	1138921	C-A	HET	INTRON
SBS	Chr11	14183016	G-A	HET	INTERGENIC
SBS	Chr11	15542868	G-T	HET	INTERGENIC
SBS	Chr11	15542869	A-T	HET	INTERGENIC
SBS	Chr11	27190142	T-C	HOMO	INTERGENIC
SBS	Chr11	27690391	G-T	HOMO	UTR_5_PRIME
SBS	Chr11	9091954	T-A	HET	INTRON
SBS	Chr11	9091976	T-C	HET	SYNONYMOUS_CODING
SBS	Chr12	23779575	G-A	HET	SYNONYMOUS_CODING
SBS	Chr12	8623801	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g15110
SBS	Chr12	8841816	A-T	HET	INTERGENIC
SBS	Chr2	23256207	T-C	HOMO	INTRON
SBS	Chr3	13712745	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr3	15023750	T-A	HET	INTERGENIC
SBS	Chr4	13435680	C-G	HOMO	INTRON
SBS	Chr4	25448805	G-T	HET	INTERGENIC
SBS	Chr4	7950892	A-T	HET	INTERGENIC
SBS	Chr5	1072603	C-T	HET	INTERGENIC
SBS	Chr5	12569266	A-T	HET	INTERGENIC
SBS	Chr5	14577128	G-A	HET	INTERGENIC
SBS	Chr6	16595957	T-A	HOMO	INTRON
SBS	Chr6	20565593	G-A	HOMO	INTERGENIC
SBS	Chr6	2692577	A-T	HET	INTRON
SBS	Chr6	7525642	G-A	HET	INTERGENIC
SBS	Chr7	15068769	G-A	HET	INTERGENIC
SBS	Chr8	10519098	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr8	26498729	T-A	HET	INTERGENIC
SBS	Chr8	26502652	A-T	HET	INTRON

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	207639	207641	2	LOC_Os06g01320
Deletion	Chr8	1401035	1401036	1
Deletion	Chr3	3774186	3774203	17
Deletion	Chr12	4184532	4184534	2
Deletion	Chr4	4417387	4417406	19
Deletion	Chr1	5263929	5263932	3	LOC_Os01g10100
Deletion	Chr8	6019020	6024031	5011	LOC_Os08g10310
Deletion	Chr10	7296575	7296576	1
Deletion	Chr10	7296807	7296816	9
Deletion	Chr2	7422919	7422921	2
Deletion	Chr12	11255855	11255862	7
Deletion	Chr5	13844387	13844392	5
Deletion	Chr10	14326056	14326057	1
Deletion	Chr8	18705721	18705844	123
Deletion	Chr5	20791945	20791953	8	LOC_Os05g35000
Deletion	Chr7	21054405	21054406	1
Deletion	Chr7	21226467	21226500	33
Deletion	Chr7	21759773	21759785	12
Deletion	Chr2	25258704	25258712	8

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr7	26321214	26321218	5	LOC_Os07g44040

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	9305614	9314594	LOC_Os04g17000

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	18244344	Chr6	12149477	2

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