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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	2291742	A-G	HET	INTERGENIC
SBS	Chr1	5715340	T-G	HOMO	INTERGENIC
SBS	Chr10	21925882	T-A	HET	INTERGENIC
SBS	Chr11	10420883	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g18480
SBS	Chr11	9223879	A-G	HOMO	INTRON
SBS	Chr12	12156854	A-T	HET	INTERGENIC
SBS	Chr12	12156858	C-T	HET	INTERGENIC
SBS	Chr12	9645094	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g16820
SBS	Chr2	3100370	C-T	HOMO	INTERGENIC
SBS	Chr3	13971504	A-T	HET	UTR_3_PRIME
SBS	Chr3	33318825	G-T	HET	STOP_GAINED	LOC_Os03g58490
SBS	Chr3	33318826	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g58490
SBS	Chr3	34452102	T-C	HET	INTERGENIC
SBS	Chr4	17674137	G-A	HET	INTERGENIC
SBS	Chr4	3485801	C-T	HET	INTRON
SBS	Chr5	19046377	A-C	HET	INTERGENIC
SBS	Chr5	19808620	C-T	HET	INTERGENIC
SBS	Chr6	26582824	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g44070
SBS	Chr7	13626063	G-A	HOMO	INTERGENIC
SBS	Chr7	2847389	T-C	HET	INTERGENIC
SBS	Chr7	9815020	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr9	19518068	T-A	HET	INTERGENIC

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	1105271	1105272	1
Deletion	Chr3	3021957	3021979	22
Deletion	Chr9	8756153	8756167	14
Deletion	Chr9	11997781	11997782	1
Deletion	Chr8	15656169	15656184	15
Deletion	Chr7	16493001	16725000	232000	31
Deletion	Chr4	16748267	16748268	1
Deletion	Chr7	18619001	18637000	18000	3
Deletion	Chr4	18971924	18971925	1
Deletion	Chr3	25783963	25783964	1
Deletion	Chr1	30797904	30797931	27
Deletion	Chr2	33455096	33455105	9

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr4	31505595	31505596	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	9023036	9618688
Inversion	Chr1	17647459	17762044	2

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	11140870	Chr2	19691663
Translocation	Chr11	14501408	Chr2	2772533	2

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