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| Mutant Information |
|---|
| Mutant Name | FN1016-S [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN1016-S Alignment File |
| Seed Availability | Yes [Order Seeds] |
| Variant Information |
|---|
Single base substitutions: 11
| Variant Type | Chromosome | Position | Change | Genotype | Effect | Gene Affected |
|---|---|---|---|---|---|---|
| SBS | Chr1 | 10741956 | G-T | HET | INTRON | |
| SBS | Chr1 | 10741957 | G-T | HET | INTRON | |
| SBS | Chr11 | 16097140 | T-C | HET | INTRON | |
| SBS | Chr12 | 10526235 | C-T | HET | INTERGENIC | |
| SBS | Chr12 | 12977453 | C-T | HET | INTERGENIC | |
| SBS | Chr12 | 25159584 | A-G | HET | INTERGENIC | |
| SBS | Chr4 | 17174834 | C-T | HOMO | INTRON | |
| SBS | Chr6 | 17364138 | G-A | HET | INTERGENIC | |
| SBS | Chr7 | 8949727 | G-A | HOMO | INTERGENIC | |
| SBS | Chr8 | 6716109 | C-A | HET | INTERGENIC | |
| SBS | Chr8 | 7249747 | C-T | HET | INTRON |
Deletions: 3
| Variant Type | Chromosome | Start | End | Size (bp) | Number of Genes |
|---|---|---|---|---|---|
| Deletion | Chr4 | 11789089 | 11789091 | 2 | |
| Deletion | Chr4 | 21065101 | 21065136 | 35 | |
| Deletion | Chr6 | 24286484 | 24286485 | 1 |
No Insertion
No Inversion
Translocations: 1
| Variant Type | Chromosome | Position 1 | Chromosome | Position 2 | Number of Genes |
|---|---|---|---|---|---|
| Translocation | Chr6 | 13698923 | Chr1 | 2503685 |