Search Results

Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	3393632	G-A	HET	INTERGENIC
SBS	Chr1	25247238	A-T	HET	INTERGENIC
SBS	Chr1	28276462	G-A	HOMO	INTERGENIC
SBS	Chr1	34596593	A-G	HET	INTRON
SBS	Chr1	36389864	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g62820
SBS	Chr1	36558286	G-A	HET	INTERGENIC
SBS	Chr1	36558287	C-A	HET	INTERGENIC
SBS	Chr3	14891295	C-T	HET	INTERGENIC
SBS	Chr3	27234151	C-T	HOMO	INTERGENIC
SBS	Chr4	547656	G-T	HET	INTRON
SBS	Chr4	8881385	G-T	HET	INTERGENIC
SBS	Chr4	13249064	C-T	HET	INTERGENIC
SBS	Chr4	13249066	C-A	HET	INTERGENIC
SBS	Chr4	19256157	C-G	HET	INTERGENIC
SBS	Chr4	19256158	C-T	HET	INTERGENIC
SBS	Chr4	33714663	G-T	HET	INTRON
SBS	Chr5	11749525	G-A	HET	SYNONYMOUS_CODING
SBS	Chr5	13447675	G-A	HET	SYNONYMOUS_CODING
SBS	Chr5	21171554	C-T	HOMO	INTERGENIC
SBS	Chr6	8374942	C-A	HET	UTR_3_PRIME
SBS	Chr6	30436203	G-A	HOMO	INTRON
SBS	Chr7	7534815	T-C	HET	INTERGENIC
SBS	Chr7	14615522	G-C	HET	INTERGENIC
SBS	Chr8	8410838	A-T	HOMO	INTERGENIC
SBS	Chr8	22746941	G-A	HOMO	INTERGENIC
SBS	Chr8	24372238	T-C	HOMO	INTERGENIC
SBS	Chr9	6321623	G-T	HOMO	INTERGENIC
SBS	Chr10	13115550	G-A	HET	INTERGENIC
SBS	Chr10	15560277	C-T	HOMO	INTERGENIC
SBS	Chr11	18202815	G-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os11g31220
SBS	Chr11	25579475	G-A	HOMO	INTERGENIC
SBS	Chr11	26648816	C-A	HOMO	INTERGENIC
SBS	Chr12	1038671	G-T	HET	INTERGENIC
SBS	Chr12	14385621	C-T	HET	INTERGENIC

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	480987	480988	1	LOC_Os01g01870
Deletion	Chr12	4002362	4002367	5
Deletion	Chr9	4171271	4171274	3
Deletion	Chr7	6025740	6025777	37
Deletion	Chr5	6245919	6245920	1
Deletion	Chr3	7273553	7273556	3
Deletion	Chr7	10210102	10210103	1
Deletion	Chr10	10705356	10705357	1
Deletion	Chr4	12660628	12660640	12
Deletion	Chr8	13111301	13111308	7
Deletion	Chr5	13287153	13287156	3
Deletion	Chr2	16802427	16802450	23
Deletion	Chr3	19226597	19226598	1
Deletion	Chr1	19238990	19238991	1
Deletion	Chr3	20271173	20271179	6
Deletion	Chr6	21241374	21241380	6
Deletion	Chr4	22345724	22345732	8	LOC_Os04g37540
Deletion	Chr11	22845889	22845891	2
Deletion	Chr6	24313166	24313168	2
Deletion	Chr11	25574354	25574410	56
Deletion	Chr3	25946908	25946928	20
Deletion	Chr3	27823022	27823034	12	LOC_Os03g48840

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	32927930	32927931	2
Insertion	Chr2	21008158	21008159	2	LOC_Os02g35010
Insertion	Chr4	2128782	2128783	2
Insertion	Chr7	12555072	12555073	2
Insertion	Chr11	24143166	24143166	1

No Inversion

Translocations: 9

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	822542	Chr8	2513196	2
Translocation	Chr11	822543	Chr5	317259	2
Translocation	Chr4	4446203	Chr2	10703349
Translocation	Chr9	14550002	Chr4	16367966
Translocation	Chr4	16367928	Chr1	742241
Translocation	Chr4	16367931	Chr1	35653006
Translocation	Chr12	17357821	Chr4	4446207
Translocation	Chr12	17357825	Chr11	23187875
Translocation	Chr9	20666146	Chr4	12139997	LOC_Os04g21460

Main menu