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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10367886	G-T	HOMO	INTERGENIC
SBS	Chr1	14805921	G-A	HET	INTERGENIC
SBS	Chr1	16198303	G-A	HET	INTERGENIC
SBS	Chr1	21307269	G-A	HOMO	INTRON
SBS	Chr1	23156595	G-A	HET	INTERGENIC
SBS	Chr1	37980085	G-A	HET	INTERGENIC
SBS	Chr1	42368232	G-A	HOMO	INTERGENIC
SBS	Chr1	4654083	G-A	HOMO	INTERGENIC
SBS	Chr10	7097000	G-A	HOMO	INTERGENIC
SBS	Chr10	8628726	A-T	HOMO	INTERGENIC
SBS	Chr11	23654690	T-C	HET	INTERGENIC
SBS	Chr11	2479969	A-C	HET	INTERGENIC
SBS	Chr11	3197493	T-A	HET	INTERGENIC
SBS	Chr12	16232617	G-A	HET	INTERGENIC
SBS	Chr3	23022367	C-T	HOMO	INTRON
SBS	Chr3	8120300	A-T	HET	INTERGENIC
SBS	Chr3	8120302	A-T	HET	INTERGENIC
SBS	Chr5	12358349	C-T	HET	INTRON
SBS	Chr5	7861079	C-T	HET	INTERGENIC
SBS	Chr6	1441093	T-C	HET	INTRON
SBS	Chr6	20454048	G-A	HOMO	INTERGENIC
SBS	Chr6	8800591	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr7	20926746	T-G	HOMO	INTERGENIC
SBS	Chr7	20926750	G-A	HOMO	INTERGENIC
SBS	Chr7	24513065	G-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os07g40950
SBS	Chr8	1059930	C-G	HET	INTERGENIC
SBS	Chr8	18082378	C-T	HET	INTERGENIC

Deletions: 18

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	3375543	3375551	8
Deletion	Chr1	3654059	3654060	1
Deletion	Chr11	5718820	5734960	16140	LOC_Os11g10490
Deletion	Chr10	5994856	5994857	1	LOC_Os10g10830
Deletion	Chr4	6570075	6570080	5
Deletion	Chr5	8962001	8994000	32000	6
Deletion	Chr7	13044837	13044848	11
Deletion	Chr2	13218835	13218843	8
Deletion	Chr5	15046036	15046073	37
Deletion	Chr11	15278349	15278350	1	LOC_Os11g26670
Deletion	Chr5	16383900	16383915	15
Deletion	Chr5	17257450	17257457	7
Deletion	Chr9	20181618	20181625	7	LOC_Os09g34180
Deletion	Chr9	21355499	21355505	6
Deletion	Chr4	21786477	21786491	14
Deletion	Chr5	24927304	24927312	8
Deletion	Chr3	25269679	25269698	19
Deletion	Chr4	34607407	34607409	2	LOC_Os04g58110

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	23798371	23798372	2
Insertion	Chr11	14574914	14574915	2
Insertion	Chr4	22459226	22459226	1
Insertion	Chr7	14662587	14662587	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	463820	476069

No Translocation

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