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Mutant Information

Variant Information

Single base substitutions: 38

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	15563453	A-T	HOMO	INTERGENIC
SBS	Chr1	16471966	A-G	HOMO	INTRON
SBS	Chr1	19577748	C-T	HOMO	INTERGENIC
SBS	Chr1	19577749	C-T	HOMO	INTERGENIC
SBS	Chr1	28521005	C-G	HOMO	INTERGENIC
SBS	Chr10	10329795	T-C	HOMO	INTERGENIC
SBS	Chr10	21022937	A-G	HOMO	INTERGENIC
SBS	Chr11	13213919	T-A	HET	INTERGENIC
SBS	Chr11	16584427	T-C	HET	INTERGENIC
SBS	Chr11	21495545	A-G	HET	INTRON
SBS	Chr12	11308543	A-G	HOMO	SPLICE_SITE_REGION
SBS	Chr12	14713137	A-G	HET	INTERGENIC
SBS	Chr12	3097907	A-C	HOMO	INTERGENIC
SBS	Chr12	9016164	T-C	HET	INTERGENIC
SBS	Chr2	21000170	A-C	HET	INTERGENIC
SBS	Chr2	2365089	C-T	HET	INTERGENIC
SBS	Chr2	3657044	C-T	HET	INTERGENIC
SBS	Chr2	9373243	T-C	HET	INTERGENIC
SBS	Chr3	1049098	C-G	HET	INTERGENIC
SBS	Chr3	32848120	T-A	HOMO	INTERGENIC
SBS	Chr3	6612176	T-A	HET	INTERGENIC
SBS	Chr3	7996528	C-T	HET	INTERGENIC
SBS	Chr4	16881513	A-T	HET	INTERGENIC
SBS	Chr4	23594346	C-T	HET	INTERGENIC
SBS	Chr4	6616093	A-G	HET	INTERGENIC
SBS	Chr5	14761384	C-T	HET	INTERGENIC
SBS	Chr5	1778692	T-C	HET	INTERGENIC
SBS	Chr5	1797643	A-C	HET	INTERGENIC
SBS	Chr5	20610690	A-G	HET	INTERGENIC
SBS	Chr5	21939681	G-A	HOMO	INTERGENIC
SBS	Chr6	29674921	A-C	HET	INTERGENIC
SBS	Chr6	7783651	G-A	HET	INTRON
SBS	Chr7	2750163	C-T	HET	INTERGENIC
SBS	Chr8	12785019	G-A	HOMO	INTERGENIC
SBS	Chr8	17348560	A-G	HET	INTRON
SBS	Chr8	7252745	C-T	HET	INTERGENIC
SBS	Chr9	11985556	C-T	HET	INTERGENIC
SBS	Chr9	6680985	A-G	HET	INTERGENIC

Deletions: 25

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	1608022	1608032	10
Deletion	Chr5	1754482	1754493	11
Deletion	Chr3	4131262	4131308	46	LOC_Os03g08090
Deletion	Chr3	4276948	4276949	1
Deletion	Chr3	5612598	5612603	5
Deletion	Chr7	6924515	6924532	17
Deletion	Chr2	7999117	7999135	18	LOC_Os02g14520
Deletion	Chr3	9367234	9367235	1
Deletion	Chr5	9833390	9833396	6
Deletion	Chr9	11018556	11018557	1
Deletion	Chr4	13413097	13413098	1
Deletion	Chr5	14828807	14828809	2
Deletion	Chr6	17013244	17013268	24
Deletion	Chr7	17365366	17365835	469	LOC_Os07g29570
Deletion	Chr7	19447678	19447685	7
Deletion	Chr11	20191113	20191120	7
Deletion	Chr12	20904835	20904840	5
Deletion	Chr5	24270278	24270283	5
Deletion	Chr5	24787358	24787368	10
Deletion	Chr5	25497293	25497311	18	LOC_Os05g43850
Deletion	Chr6	29456297	29456303	6
Deletion	Chr1	29914829	29914835	6
Deletion	Chr1	31167055	31167060	5	LOC_Os01g54190
Deletion	Chr2	33466132	33466141	9
Deletion	Chr1	36289231	36289249	18	LOC_Os01g62660

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	39804019	39804020	2
Insertion	Chr10	21671345	21671345	1
Insertion	Chr11	28676529	28676531	3
Insertion	Chr4	31920391	31920392	2
Insertion	Chr5	27863457	27863460	4
Insertion	Chr5	5670235	5670235	1
Insertion	Chr8	8722852	8722855	4

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	20529231	21049367	LOC_Os12g34670

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	14585666	Chr7	17365368	LOC_Os09g24490

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