Search Results

Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	2034610	A-G	HET	INTERGENIC
SBS	Chr1	13915089	C-T	HET	INTERGENIC
SBS	Chr1	26528654	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g46580
SBS	Chr1	35495565	G-A	HOMO	INTERGENIC
SBS	Chr2	3314151	T-G	HET	INTRON
SBS	Chr2	4682606	C-T	HET	INTRON
SBS	Chr2	19872401	A-G	HOMO	INTRON
SBS	Chr2	34798988	A-T	HET	INTRON
SBS	Chr4	21735990	G-A	HET	INTERGENIC
SBS	Chr5	670478	T-C	HET	INTERGENIC
SBS	Chr6	16196322	A-T	HOMO	INTERGENIC
SBS	Chr6	19384176	A-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g33290
SBS	Chr6	25562800	T-C	HET	INTERGENIC
SBS	Chr7	9316660	C-G	HOMO	INTERGENIC
SBS	Chr8	10631673	A-T	HET	SPLICE_SITE_ACCEPTOR	LOC_Os08g17390
SBS	Chr8	19457149	C-T	HET	INTRON
SBS	Chr8	23925578	G-T	HET	SYNONYMOUS_CODING
SBS	Chr10	1022376	G-A	HET	INTERGENIC
SBS	Chr10	1867615	C-T	HET	INTERGENIC
SBS	Chr11	11477660	G-A	HET	INTERGENIC
SBS	Chr11	12628894	T-C	HET	INTERGENIC
SBS	Chr11	14821573	C-A	HET	INTERGENIC
SBS	Chr11	15608646	G-A	HET	INTERGENIC
SBS	Chr11	15608647	T-A	HET	INTERGENIC
SBS	Chr11	16513997	C-G	HET	INTERGENIC
SBS	Chr11	23768054	C-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os11g39870
SBS	Chr11	25218981	G-A	HET	SYNONYMOUS_CODING
SBS	Chr11	25701160	T-C	HET	INTERGENIC

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	1348387	1348391	4
Deletion	Chr10	2762853	2762857	4
Deletion	Chr2	5063132	5063149	17	LOC_Os02g09820
Deletion	Chr4	6533140	6533142	2
Deletion	Chr2	6914229	6914236	7
Deletion	Chr5	7723052	7723053	1	LOC_Os05g13900
Deletion	Chr6	8989136	8989153	17
Deletion	Chr2	9471714	9471739	25	LOC_Os02g16560
Deletion	Chr9	11717875	11717877	2	LOC_Os09g19590
Deletion	Chr11	12774886	12774894	8	LOC_Os11g22280
Deletion	Chr10	13029980	13029982	2
Deletion	Chr3	15328701	15328782	81
Deletion	Chr8	16158770	16158776	6
Deletion	Chr10	16296225	16296227	2	LOC_Os10g31120
Deletion	Chr4	17368137	17368138	1
Deletion	Chr1	17432366	17432387	21
Deletion	Chr6	18841493	18841494	1
Deletion	Chr4	19833698	19833700	2
Deletion	Chr4	20311377	20311378	1
Deletion	Chr1	23742241	23742252	11
Deletion	Chr8	23922538	23922539	1	LOC_Os08g37760
Deletion	Chr1	24012985	24013002	17
Deletion	Chr8	24159962	24159967	5
Deletion	Chr8	24396525	24396529	4
Deletion	Chr5	24421871	24421886	15
Deletion	Chr4	24643132	24643146	14
Deletion	Chr6	25826746	25826761	15
Deletion	Chr1	26217868	26217869	1	LOC_Os01g46110
Deletion	Chr6	26980664	26980668	4	LOC_Os06g44690
Deletion	Chr3	27516184	27516185	1	LOC_Os03g48310
Deletion	Chr1	28643519	28643544	25
Deletion	Chr1	29573936	29573953	17
Deletion	Chr1	29906001	30015000	109000	14
Deletion	Chr1	40606073	40606083	10

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr2	16569589	16569592	4
Insertion	Chr3	1417094	1417095	2
Insertion	Chr4	29452999	29452999	1
Insertion	Chr6	20677302	20677303	2
Insertion	Chr6	31241380	31241381	2
Insertion	Chr8	10131544	10131545	2
Insertion	Chr10	2528641	2528642	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	15434977	15714343	LOC_Os11g27329

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	10453751	Chr2	12969305

Main menu