Search Results

Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	5995170	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr1	10353457	A-G	HOMO	INTERGENIC
SBS	Chr2	6030793	C-A	HOMO	INTERGENIC
SBS	Chr2	6661286	T-G	HOMO	INTERGENIC
SBS	Chr2	19754013	T-C	HOMO	INTRON
SBS	Chr3	7262420	C-T	HET	INTERGENIC
SBS	Chr3	15777508	T-A	HOMO	INTERGENIC
SBS	Chr4	2443014	G-T	HET	INTRON
SBS	Chr4	8521594	G-A	HOMO	INTERGENIC
SBS	Chr4	19312377	C-A	HET	INTRON
SBS	Chr4	19312382	C-T	HET	INTRON
SBS	Chr5	4052332	C-A	HOMO	INTERGENIC
SBS	Chr5	5188515	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os05g09280
SBS	Chr5	12129432	A-T	HOMO	INTERGENIC
SBS	Chr6	905966	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os06g02570
SBS	Chr6	8408988	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os06g14810
SBS	Chr6	8409155	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g14810
SBS	Chr6	12079817	C-T	HET	INTERGENIC
SBS	Chr6	20320164	T-C	HET	INTERGENIC
SBS	Chr6	23167862	C-G	HOMO	NON_SYNONYMOUS_CODING	LOC_Os06g39020
SBS	Chr6	24057006	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr6	24622352	G-A	HOMO	INTERGENIC
SBS	Chr7	5078901	A-G	HOMO	INTERGENIC
SBS	Chr7	9792819	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g16690
SBS	Chr7	12110676	A-G	HET	INTERGENIC
SBS	Chr8	4529019	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os08g08000
SBS	Chr8	5904273	C-T	HET	INTERGENIC
SBS	Chr9	20401278	C-T	HOMO	INTERGENIC
SBS	Chr10	5018153	T-A	HET	INTRON
SBS	Chr12	3668482	C-G	HOMO	INTERGENIC
SBS	Chr12	10926172	T-A	HOMO	INTERGENIC
SBS	Chr12	17921015	T-A	HET	INTERGENIC
SBS	Chr12	20407024	G-A	HET	INTERGENIC
SBS	Chr12	23358815	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g38020

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	648001	689000	41000	6
Deletion	Chr10	3671004	3671005	1
Deletion	Chr7	9792824	9792826	2	LOC_Os07g16690
Deletion	Chr12	13247818	13247826	8	LOC_Os12g23430
Deletion	Chr4	15486905	15486928	23
Deletion	Chr12	17920411	17920416	5
Deletion	Chr9	18590322	18590323	1
Deletion	Chr4	19016787	19016801	14
Deletion	Chr1	19705029	19705045	16	LOC_Os01g35600
Deletion	Chr4	20597967	20597973	6
Deletion	Chr9	22006480	22006488	8
Deletion	Chr5	22975204	22975216	12	LOC_Os05g39180
Deletion	Chr8	23595267	23595274	7
Deletion	Chr4	26971166	26971170	4
Deletion	Chr6	27242955	27243198	243	LOC_Os06g45030
Deletion	Chr6	27564388	27564390	2
Deletion	Chr3	28915622	28915623	1
Deletion	Chr4	29469265	29469270	5
Deletion	Chr3	29618236	29618245	9
Deletion	Chr6	30492888	30492894	6	LOC_Os06g50370
Deletion	Chr1	41677696	41677703	7

Insertions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr8	28108846	28108847	2
Insertion	Chr2	25586548	25586549	2
Insertion	Chr3	8163030	8163032	3
Insertion	Chr3	12761162	12761162	1
Insertion	Chr6	747275	747275	1
Insertion	Chr7	537818	537818	1	LOC_Os07g01890
Insertion	Chr7	26321214	26321218	5	LOC_Os07g44040
Insertion	Chr8	970783	970788	6
Insertion	Chr8	20608471	20608472	2
Insertion	Chr8	26595598	26595598	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	614348	648259	2
Inversion	Chr6	615118	688997

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	10408738	Chr4	17874184

Main menu