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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	22959332	A-T	HET	INTERGENIC
SBS	Chr2	1080195	C-T	HOMO	INTERGENIC
SBS	Chr2	28204113	C-G	HET	INTERGENIC
SBS	Chr3	6409693	G-A	HOMO	INTERGENIC
SBS	Chr3	26731158	T-A	HOMO	INTRON
SBS	Chr4	5632033	A-T	HOMO	INTERGENIC
SBS	Chr4	16277467	A-T	HOMO	INTERGENIC
SBS	Chr4	21638400	C-A	HET	SYNONYMOUS_CODING
SBS	Chr4	25834734	C-T	HOMO	UTR_3_PRIME
SBS	Chr5	994371	G-A	HET	INTERGENIC
SBS	Chr5	5547877	G-A	HOMO	INTERGENIC
SBS	Chr5	16072494	G-A	HET	INTERGENIC
SBS	Chr6	5302506	T-A	HET	INTERGENIC
SBS	Chr6	5302507	T-A	HET	INTERGENIC
SBS	Chr6	5434705	G-T	HET	INTERGENIC
SBS	Chr7	4054391	A-G	HET	UTR_3_PRIME
SBS	Chr7	13397116	T-A	HET	INTERGENIC
SBS	Chr7	21461588	T-A	HOMO	INTERGENIC
SBS	Chr12	10762243	C-A	HOMO	INTRON
SBS	Chr12	12518705	C-T	HET	INTERGENIC
SBS	Chr12	15943162	T-G	HOMO	INTERGENIC
SBS	Chr12	24284889	G-A	HET	INTERGENIC

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	3218188	3218189	1
Deletion	Chr3	5510836	5510842	6
Deletion	Chr5	8142977	8142984	7
Deletion	Chr8	10234036	10234047	11	LOC_Os08g16740
Deletion	Chr2	12795553	12795563	10
Deletion	Chr5	15674593	15674604	11
Deletion	Chr3	16200297	16200324	27
Deletion	Chr1	16761649	16761707	58
Deletion	Chr9	17430256	17430258	2
Deletion	Chr8	18968377	18968378	1
Deletion	Chr4	21639001	21777000	138000	20
Deletion	Chr12	22794761	22794764	3
Deletion	Chr1	25679915	25679916	1
Deletion	Chr12	26449081	26449094	13	LOC_Os12g42580
Deletion	Chr11	28683290	28683291	1
Deletion	Chr4	31501001	31557000	56000	9

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr8	9793796	9793800	5
Insertion	Chr6	23437640	23437641	2
Insertion	Chr9	17298029	17298029	1
Insertion	Chr11	4889975	4889976	2
Insertion	Chr11	25825589	25825591	3

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	5979076	18186372

No Translocation

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