Search Results

Mutant Information

Variant Information

Single base substitutions: 36

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	7469468	T-G	HET	INTERGENIC
SBS	Chr1	19962054	A-C	HET	INTERGENIC
SBS	Chr1	20102239	T-G	HET	STOP_GAINED	LOC_Os01g36270
SBS	Chr2	12837383	T-A	HET	INTERGENIC
SBS	Chr2	20204588	G-A	HET	SYNONYMOUS_CODING
SBS	Chr2	21092145	C-G	HET	INTERGENIC
SBS	Chr2	21961390	A-C	HET	INTERGENIC
SBS	Chr2	24008839	T-A	HOMO	INTERGENIC
SBS	Chr2	33026907	A-T	HET	INTERGENIC
SBS	Chr3	6243905	C-G	HET	INTERGENIC
SBS	Chr3	6405209	G-A	HET	INTRON
SBS	Chr3	7261448	C-T	HET	INTERGENIC
SBS	Chr3	14568051	C-T	HET	INTRON
SBS	Chr3	19055346	G-A	HET	INTERGENIC
SBS	Chr3	33541839	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g58910
SBS	Chr4	13888214	G-A	HOMO	INTERGENIC
SBS	Chr4	27441010	G-T	HOMO	INTERGENIC
SBS	Chr4	30598011	C-G	HET	INTERGENIC
SBS	Chr5	1965199	A-G	HOMO	INTERGENIC
SBS	Chr5	12988121	A-G	HET	INTERGENIC
SBS	Chr5	16208099	G-T	HET	INTERGENIC
SBS	Chr5	20860796	C-T	HET	INTERGENIC
SBS	Chr6	21455073	C-T	HET	INTERGENIC
SBS	Chr6	24402928	G-A	HET	INTRON
SBS	Chr7	8420291	G-A	HET	INTERGENIC
SBS	Chr7	8827876	A-T	HET	INTERGENIC
SBS	Chr7	9820112	G-T	HET	INTERGENIC
SBS	Chr7	10063273	C-T	HET	INTERGENIC
SBS	Chr7	29459433	C-T	HET	INTERGENIC
SBS	Chr8	8359394	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g13950
SBS	Chr9	21926389	C-T	HET	INTERGENIC
SBS	Chr11	409579	C-T	HET	INTERGENIC
SBS	Chr11	20783228	T-A	HOMO	INTERGENIC
SBS	Chr11	25104823	C-G	HET	INTRON
SBS	Chr11	27826424	A-T	HET	INTERGENIC
SBS	Chr12	19268358	T-C	HOMO	INTERGENIC

Deletions: 27

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	406767	406773	6
Deletion	Chr7	415342	415344	2
Deletion	Chr4	1253365	1253366	1
Deletion	Chr7	1289949	1289951	2
Deletion	Chr12	2907701	2907710	9
Deletion	Chr11	3645321	3645331	10
Deletion	Chr7	5526363	5526364	1	LOC_Os07g10300
Deletion	Chr2	6060175	6060176	1	LOC_Os02g11740
Deletion	Chr5	6927531	6927532	1
Deletion	Chr9	7010712	7010727	15
Deletion	Chr12	8177784	8177785	1
Deletion	Chr9	9837371	9837389	18
Deletion	Chr8	13075284	13075288	4
Deletion	Chr10	13175293	13175302	9
Deletion	Chr12	17963376	17963377	1	LOC_Os12g30020
Deletion	Chr3	18212811	18212817	6
Deletion	Chr1	18842370	18850222	7852	LOC_Os01g34190
Deletion	Chr1	19050882	19050883	1
Deletion	Chr12	19304366	19304370	4
Deletion	Chr8	22753883	22753892	9
Deletion	Chr1	24053909	24053910	1
Deletion	Chr3	25067644	25067646	2
Deletion	Chr8	26494982	26494984	2
Deletion	Chr1	27654112	27654131	19
Deletion	Chr4	30273318	30273344	26
Deletion	Chr1	30703151	30703164	13
Deletion	Chr4	35297807	35297982	175	LOC_Os04g59380

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr12	1081945	1081947	3	LOC_Os12g02920
Insertion	Chr1	4952692	4952722	31
Insertion	Chr11	15152328	15152328	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	24451588	24653721

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	3234375	Chr1	23346976
Translocation	Chr8	6359481	Chr7	24590690
Translocation	Chr9	14084780	Chr4	10830346	2
Translocation	Chr9	14084782	Chr4	10829936	2
Translocation	Chr4	35297965	Chr3	25093103	2

Main menu