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| Mutant Information |
|---|
| Mutant Name | FN1554-M [Download] |
| Generation | M2 |
| Genus Species | Oryza Sativa |
| Cultivar | Kitaake |
| Alignment File (BAM File) | Download FN1554-M Alignment File |
| Seed Availability | No |
| Mapping (Hover to Zoom-In) | 
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| Variant Information |
|---|
Single base substitutions: 5
| Variant Type | Chromosome | Position | Change | Genotype | Effect | Gene Affected |
|---|---|---|---|---|---|---|
| SBS | Chr3 | 30521967 | G-T | HET | ||
| SBS | Chr3 | 9247374 | A-G | HET | ||
| SBS | Chr4 | 16304486 | T-G | HET | ||
| SBS | Chr5 | 3510454 | T-A | HET | ||
| SBS | Chr8 | 27097956 | A-G | HET |
Deletions: 1
| Variant Type | Chromosome | Start | End | Size (bp) | Number of Genes |
|---|---|---|---|---|---|
| Deletion | Chr1 | 38863001 | 38888000 | 24999 | 3 |
Insertions: 1
| Variant Type | Chromosome | Start | End | Size (bp) | Number of Genes |
|---|---|---|---|---|---|
| Insertion | Chr12 | 2070751 | 2070751 | 1 |
No Inversion
Translocations: 2
| Variant Type | Chromosome | Position 1 | Chromosome | Position 2 | Number of Genes |
|---|---|---|---|---|---|
| Translocation | Chr5 | 13933298 | Chr1 | 31269223 | |
| Translocation | Chr8 | 16788672 | Chr5 | 8556320 |