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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	19210006	C-T	HET	INTERGENIC
SBS	Chr1	20089877	G-A	HET	INTERGENIC
SBS	Chr1	20089878	G-A	HET	INTERGENIC
SBS	Chr1	20482371	C-T	HET	INTRON
SBS	Chr1	20950139	T-C	HET	INTERGENIC
SBS	Chr1	36687250	T-G	HET	INTERGENIC
SBS	Chr10	6821631	C-T	HET	INTERGENIC
SBS	Chr11	14770402	C-T	HET	INTERGENIC
SBS	Chr11	2410399	G-A	HET	INTERGENIC
SBS	Chr2	30918414	A-T	HET	INTERGENIC
SBS	Chr2	3579220	G-A	Homo	INTERGENIC
SBS	Chr3	30684922	C-T	HET	INTRON
SBS	Chr3	6860879	G-A	HET	INTERGENIC
SBS	Chr5	10834431	G-A	HET	SYNONYMOUS_CODING
SBS	Chr5	21626674	A-G	HET	INTERGENIC
SBS	Chr5	25084008	G-A	HET	INTERGENIC
SBS	Chr5	25234278	T-C	HET	INTERGENIC
SBS	Chr5	4577183	C-A	HET	INTERGENIC
SBS	Chr5	8024261	C-A	Homo	INTERGENIC
SBS	Chr5	8024262	T-A	Homo	INTERGENIC
SBS	Chr7	4905863	G-A	HET	INTERGENIC
SBS	Chr7	8999361	C-T	HET	INTRON
SBS	Chr8	4115814	T-C	Homo	INTERGENIC
SBS	Chr8	7304619	A-T	HET	INTERGENIC
SBS	Chr9	15662786	G-T	HET	UTR_3_PRIME
SBS	Chr9	4829184	G-A	Homo	INTERGENIC
SBS	Chr9	8897936	A-T	HET	INTERGENIC

Deletions: 29

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	90092	90093	1
Deletion	Chr11	901593	901606	13
Deletion	Chr6	2221925	2221932	7
Deletion	Chr8	2802656	2802675	19
Deletion	Chr6	5300056	5300057	1
Deletion	Chr1	6517777	6517803	26
Deletion	Chr2	6520633	6520636	3
Deletion	Chr9	6527213	6527215	2
Deletion	Chr12	6906936	6906937	1
Deletion	Chr11	7453124	7453131	7
Deletion	Chr9	7519001	7639000	120000	21
Deletion	Chr8	8088966	8088970	4
Deletion	Chr9	8423448	8423471	23
Deletion	Chr9	10119446	10119447	1
Deletion	Chr11	11301086	11301092	6	LOC_Os11g19610
Deletion	Chr8	11768498	11768814	316
Deletion	Chr8	12363491	12363492	1
Deletion	Chr12	13370753	13370754	1	LOC_Os12g23590
Deletion	Chr6	17178163	17178176	13
Deletion	Chr9	17235075	17235076	1
Deletion	Chr9	18031372	18031373	1
Deletion	Chr5	18437844	18437864	20
Deletion	Chr12	18960001	19056000	96000	12
Deletion	Chr3	20217001	20310000	93000	13
Deletion	Chr5	24800115	24800120	5
Deletion	Chr2	25135344	25135345	1	LOC_Os02g41800
Deletion	Chr2	25776605	25776609	4
Deletion	Chr6	28296597	28296625	28
Deletion	Chr1	31103723	31103724	1

Insertions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	12348057	12348057	1
Insertion	Chr12	10583153	10583196	44
Insertion	Chr2	14623533	14623533	1
Insertion	Chr2	5398468	5398468	1
Insertion	Chr2	5765951	5766008	58
Insertion	Chr3	12144087	12144087	1
Insertion	Chr3	16626656	16626657	2
Insertion	Chr4	3983934	3983934	1
Insertion	Chr5	18214181	18214186	6
Insertion	Chr7	11119728	11119798	71	LOC_Os07g18790
Insertion	Chr7	12002363	12002381	19
Insertion	Chr7	15676576	15676598	23
Insertion	Chr7	9166822	9166823	2
Insertion	Chr8	15238874	15238875	2
Insertion	Chr8	2218362	2218369	8
Insertion	Chr9	5816962	5816962	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	1416489	4051253	2
Inversion	Chr11	4051262	4765107	2
Inversion	Chr12	4821868	27246699
Inversion	Chr9	7193727	8661376	LOC_Os09g12550

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	5768921	Chr6	22129770
Translocation	Chr11	5768924	Chr6	22129773
Translocation	Chr5	14650760	Chr1	13836731
Translocation	Chr11	28240438	Chr8	20013015	LOC_Os11g46980

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