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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr2	8198151	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g14780
SBS	Chr3	26167760	T-C	Homo
SBS	Chr3	26716838	A-T	HET
SBS	Chr3	29482809	A-G	HET
SBS	Chr4	1230336	G-T	HET
SBS	Chr4	4173669	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g07840
SBS	Chr4	19248409	C-T	HET
SBS	Chr4	26209028	A-G	Homo
SBS	Chr4	30595886	G-A	HET
SBS	Chr5	23420902	G-T	HET	SPLICE_SITE_DONOR	LOC_Os05g39850
SBS	Chr5	27316939	T-A	Homo
SBS	Chr6	3801022	C-T	HET
SBS	Chr6	9009791	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g15870
SBS	Chr6	27988669	C-T	HET
SBS	Chr7	14981593	G-A	HET
SBS	Chr7	17259953	C-G	Homo
SBS	Chr7	21858760	C-T	HET
SBS	Chr8	7623878	C-G	HET
SBS	Chr8	12003203	C-T	HET
SBS	Chr8	13117542	C-G	HET
SBS	Chr8	28185936	T-A	Homo
SBS	Chr9	20121788	C-A	HET
SBS	Chr9	20232921	G-C	Homo
SBS	Chr10	9670463	C-T	HET
SBS	Chr11	19085033	G-A	HET
SBS	Chr11	21652194	C-T	Homo
SBS	Chr11	28863924	A-T	HET
SBS	Chr12	14525845	C-T	HET
SBS	Chr12	20685182	G-C	HET
SBS	Chr12	25763003	C-T	HET

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	2508482	2508483	1
Deletion	Chr11	2535001	2618000	82999	11
Deletion	Chr11	2623001	2736000	112999	14
Deletion	Chr2	7312080	7312081	1
Deletion	Chr5	7629007	7629008	1
Deletion	Chr5	8489108	8489110	2
Deletion	Chr1	14824286	14824294	8
Deletion	Chr1	30656956	30656957	1
Deletion	Chr1	33051061	33051062	1
Deletion	Chr1	36863276	36863283	7

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	11832750	11832751	2
Insertion	Chr4	35486462	35486509	48
Insertion	Chr7	11364199	11364206	8
Insertion	Chr12	13563755	13563755	1

Inversions: 16

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	2433778	2433878	2
Inversion	Chr11	5122908	5289692
Inversion	Chr11	5122911	5289692
Inversion	Chr2	7289589	7289818
Inversion	Chr9	10481188	10481588	LOC_Os09g17110
Inversion	Chr7	13478430	13478642
Inversion	Chr12	13621778	13621960
Inversion	Chr12	14352809	14519964	2
Inversion	Chr12	14531563	14573818	LOC_Os12g25260
Inversion	Chr3	14579066	14579306	LOC_Os03g25530
Inversion	Chr3	18128090	18128269	LOC_Os03g31730
Inversion	Chr3	25899515	25899787
Inversion	Chr12	26551975	26552131	LOC_Os12g42730
Inversion	Chr5	26958020	26958405
Inversion	Chr4	27776896	27777096
Inversion	Chr3	31142420	31142655	LOC_Os03g54780

Translocations: 11

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	3350983	Chr6	25619	2
Translocation	Chr11	5360308	Chr3	23995653	2
Translocation	Chr11	5369906	Chr3	23995630	2
Translocation	Chr6	7774694	Chr1	11768683	LOC_Os06g13960
Translocation	Chr8	10071011	Chr1	19483612	2
Translocation	Chr8	12820443	Chr2	7321111
Translocation	Chr11	14213599	Chr6	8600052
Translocation	Chr10	19194620	Chr8	28407782	2
Translocation	Chr10	19195189	Chr8	28407776	2
Translocation	Chr11	27201807	Chr4	23789077	LOC_Os11g44940
Translocation	Chr11	27201822	Chr4	23788840	LOC_Os11g44940

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