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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10269876	G-T	HET
SBS	Chr1	12991637	T-C	HET
SBS	Chr1	29226278	G-A	Homo
SBS	Chr1	5404845	G-A	HET
SBS	Chr1	7072879	A-G	HET
SBS	Chr1	9389035	T-A	HET
SBS	Chr11	11318811	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g19640
SBS	Chr11	23417138	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g39330
SBS	Chr12	13017811	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os12g23030
SBS	Chr12	21501132	A-G	Homo
SBS	Chr2	19266218	G-T	HET
SBS	Chr2	2330976	T-C	HET
SBS	Chr3	3037308	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g06060
SBS	Chr3	35530334	T-C	HET
SBS	Chr4	11339248	G-T	Homo
SBS	Chr4	17266156	G-A	HET
SBS	Chr4	19654164	G-A	HET
SBS	Chr4	28355787	T-C	HET
SBS	Chr4	7422407	G-C	HET
SBS	Chr4	8314915	G-T	HET
SBS	Chr5	12412226	G-A	HET
SBS	Chr5	21066958	G-A	Homo
SBS	Chr5	6500108	G-A	HET
SBS	Chr6	14577673	C-T	HET
SBS	Chr6	19905567	C-A	HET
SBS	Chr6	19905570	C-T	HET
SBS	Chr6	8552483	G-A	HET
SBS	Chr8	19649891	A-G	HET
SBS	Chr8	21353429	C-T	HET
SBS	Chr9	21268279	G-A	HET
SBS	Chr9	3772425	T-C	HET
SBS	Chr9	4955326	C-T	HET
SBS	Chr9	7168502	A-T	HET

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	668968	668975	7
Deletion	Chr2	2050296	2050306	10
Deletion	Chr9	3029982	3029984	2
Deletion	Chr4	3136741	3136749	8
Deletion	Chr5	8922001	8976000	53999	9
Deletion	Chr1	14945742	14945744	2
Deletion	Chr6	17298043	17298051	8
Deletion	Chr6	22660294	22660306	12
Deletion	Chr3	22865538	22865539	1
Deletion	Chr4	27410360	27410369	9
Deletion	Chr4	32587618	32587620	2
Deletion	Chr1	33458001	33495000	36999	9
Deletion	Chr1	33591001	33665000	73999	13
Deletion	Chr1	33726001	33810000	83999	13
Deletion	Chr1	36644452	36644453	1	LOC_Os01g63230
Deletion	Chr1	36678474	36678494	20

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	9519492	9519492	1
Insertion	Chr5	5851224	5851224	1

Inversions: 25

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	1502773	1502874
Inversion	Chr7	2048955	2049507	LOC_Os07g04600
Inversion	Chr2	2515622	2515912
Inversion	Chr11	4851295	4851510	LOC_Os11g09110
Inversion	Chr11	5089898	5090371
Inversion	Chr3	5343197	5343396	LOC_Os03g10500
Inversion	Chr9	6984913	6985187
Inversion	Chr10	7330552	7330808
Inversion	Chr1	7973068	7973427	LOC_Os01g14220
Inversion	Chr12	8499695	8499891
Inversion	Chr12	8499754	8499967
Inversion	Chr12	8499810	8500010
Inversion	Chr1	8847242	9236989	2
Inversion	Chr5	11245242	11245751
Inversion	Chr1	12947056	12947194
Inversion	Chr11	13371269	13371531
Inversion	Chr9	15370592	15371049
Inversion	Chr2	15482579	15482761	LOC_Os02g26370
Inversion	Chr5	16350561	16351095
Inversion	Chr9	20642892	20643155	LOC_Os09g35870
Inversion	Chr3	24185028	24185195	LOC_Os03g43374
Inversion	Chr1	24634938	24635092	LOC_Os01g43170
Inversion	Chr4	25093509	25093785
Inversion	Chr8	27056879	27056982	LOC_Os08g42750
Inversion	Chr1	29669038	29669265

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	1877733	Chr2	13467040
Translocation	Chr11	3421472	Chr9	7162016	LOC_Os11g06930
Translocation	Chr11	3421485	Chr9	7169343	2
Translocation	Chr2	18067236	Chr1	8221492

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