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Mutant Information

Variant Information

Single base substitutions: 18

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	5913517	G-A	Homo
SBS	Chr10	6728606	G-C	Homo
SBS	Chr10	7075800	C-T	Homo
SBS	Chr11	24237317	T-A	Homo
SBS	Chr12	18920708	T-C	HET
SBS	Chr2	30086384	T-A	HET
SBS	Chr2	4327973	T-A	HET
SBS	Chr3	14413091	C-T	Homo
SBS	Chr3	16946979	T-C	HET
SBS	Chr4	1086984	G-A	HET
SBS	Chr4	12173534	A-G	Homo
SBS	Chr4	2082077	C-A	Homo
SBS	Chr5	24448941	C-A	Homo
SBS	Chr6	15730198	C-T	HET
SBS	Chr6	16368698	A-G	HET
SBS	Chr6	27592610	G-C	HET
SBS	Chr7	10975437	C-T	HET
SBS	Chr8	1544448	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os08g03330

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	756688	756689	1
Deletion	Chr5	4038957	4038958	1	LOC_Os05g07540
Deletion	Chr7	5301251	5301270	19
Deletion	Chr8	7220970	7220973	3	LOC_Os08g12270
Deletion	Chr4	8534995	8534997	2
Deletion	Chr3	8825413	8825414	1
Deletion	Chr5	10686298	10686299	1
Deletion	Chr4	16400838	16400839	1
Deletion	Chr6	21858057	21858060	3
Deletion	Chr12	24664999	24665001	2
Deletion	Chr7	25392067	25392068	1
Deletion	Chr11	28607685	28607686	1

Insertions: 10

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	10348131	10348133	3
Insertion	Chr11	1476412	1476413	2
Insertion	Chr11	17989032	17989034	3
Insertion	Chr12	13719982	13719982	1
Insertion	Chr2	34287786	34287789	4
Insertion	Chr2	8352718	8352720	3
Insertion	Chr4	1274218	1274220	3
Insertion	Chr4	25392995	25392997	3
Insertion	Chr4	4255541	4255541	1
Insertion	Chr8	17916507	17916507	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	21550043	22201741

Translocations: 27

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	696993	Chr11	652666	LOC_Os12g02240
Translocation	Chr9	1610932	Chr5	15682337	2
Translocation	Chr10	5024557	Chr6	21856114
Translocation	Chr12	6992360	Chr9	1026791
Translocation	Chr9	7836052	Chr5	10185767
Translocation	Chr4	10482106	Chr3	2356046	LOC_Os04g18840
Translocation	Chr6	11007773	Chr3	23145067	2
Translocation	Chr10	12580401	Chr8	14922478
Translocation	Chr6	13038736	Chr4	1433428	LOC_Os06g22430
Translocation	Chr11	14501285	Chr2	2772700	2
Translocation	Chr11	15249087	Chr1	11769608
Translocation	Chr9	16923022	Chr7	5329639	2
Translocation	Chr8	17990054	Chr2	32007572
Translocation	Chr12	18301853	Chr9	21567476	LOC_Os12g30490
Translocation	Chr10	19041972	Chr3	9455482	2
Translocation	Chr12	19111503	Chr9	12313623	LOC_Os12g31748
Translocation	Chr2	19415460	Chr1	18684954	2
Translocation	Chr9	20546969	Chr6	23626448	LOC_Os09g35720
Translocation	Chr7	21032857	Chr6	10568469
Translocation	Chr6	22249449	Chr4	20828281	LOC_Os06g37560
Translocation	Chr4	22547314	Chr1	7916875
Translocation	Chr2	22548586	Chr1	3012119	2
Translocation	Chr11	24374254	Chr8	17449760
Translocation	Chr12	27012188	Chr2	8113869
Translocation	Chr11	28168665	Chr5	29598156	2
Translocation	Chr11	28480694	Chr4	3329195
Translocation	Chr4	29934408	Chr3	21827777	2

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