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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	27670077	T-A	Homo
SBS	Chr10	10157346	A-C	Homo
SBS	Chr10	9485861	A-T	HET
SBS	Chr11	15489268	T-G	Homo
SBS	Chr11	22261000	C-T	HET
SBS	Chr12	7167855	G-A	HET
SBS	Chr12	9334791	A-G	Homo
SBS	Chr2	15610371	G-A	HET
SBS	Chr2	21120418	C-A	HET
SBS	Chr2	6193169	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g11940
SBS	Chr3	22740387	T-A	HET
SBS	Chr3	34386404	C-A	HET
SBS	Chr3	36195444	C-A	HET
SBS	Chr4	16561644	C-T	Homo
SBS	Chr4	6040885	C-A	Homo
SBS	Chr5	5103576	C-G	HET
SBS	Chr6	13547225	G-A	HET
SBS	Chr7	12400244	G-A	HET
SBS	Chr7	17542504	G-A	Homo
SBS	Chr7	1807615	T-C	HET
SBS	Chr7	25695020	T-C	Homo
SBS	Chr7	9136644	G-A	HET
SBS	Chr8	13182289	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os08g21990
SBS	Chr9	149062	G-C	HET
SBS	Chr9	5558133	A-T	HET

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	5190498	5190506	8
Deletion	Chr11	5532489	5532495	6	LOC_Os11g10200
Deletion	Chr11	14245001	14308000	62999	9
Deletion	Chr11	14555001	14832000	276999	40
Deletion	Chr5	15153892	15153908	16
Deletion	Chr5	18557650	18557663	13
Deletion	Chr6	19850169	19850174	5
Deletion	Chr8	21225482	21225487	5
Deletion	Chr6	21935704	21935707	3
Deletion	Chr9	22523001	22535000	11999
Deletion	Chr1	23370991	23371007	16
Deletion	Chr8	23655136	23655148	12
Deletion	Chr8	28135337	28135351	14
Deletion	Chr3	30395940	30395941	1	LOC_Os03g53000
Deletion	Chr4	30907001	30952000	44999	8
Deletion	Chr2	32570001	32696000	125999	25

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	16671982	16672012	31
Insertion	Chr2	4584795	4584796	2
Insertion	Chr3	11236907	11236915	9
Insertion	Chr4	30096055	30096055	1
Insertion	Chr5	7487590	7487593	4	LOC_Os05g13510

No Inversion

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	1807494	Chr3	33568435
Translocation	Chr7	1819838	Chr3	33568449
Translocation	Chr5	5212063	Chr1	19483686	2
Translocation	Chr5	6359037	Chr4	16101642	2
Translocation	Chr8	10070851	Chr5	5212167	2
Translocation	Chr11	10453429	Chr10	9882875
Translocation	Chr8	11138952	Chr3	35510258
Translocation	Chr8	11139535	Chr3	35510260
Translocation	Chr8	11643495	Chr2	16324429	2
Translocation	Chr8	11643809	Chr2	16324420	2
Translocation	Chr11	14236559	Chr2	17048633	2
Translocation	Chr11	14831524	Chr2	17049025	2
Translocation	Chr12	18527495	Chr11	14827070	2
Translocation	Chr3	35300947	Chr2	16480452	2

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