Search Results

Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	4110869	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g08380
SBS	Chr1	4706309	T-C	Homo
SBS	Chr1	10867927	A-T	Homo
SBS	Chr1	34782550	G-A	HET
SBS	Chr2	30962433	G-A	HET
SBS	Chr2	31384295	G-A	HET
SBS	Chr2	34397171	A-C	Homo
SBS	Chr3	10557804	T-G	Homo
SBS	Chr3	14121329	T-C	HET
SBS	Chr3	15497178	C-T	Homo
SBS	Chr4	662045	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g02070
SBS	Chr4	10613700	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g19114
SBS	Chr4	15344004	G-C	Homo
SBS	Chr5	6282810	A-T	Homo
SBS	Chr5	15884850	T-A	HET
SBS	Chr6	12015253	A-G	HET
SBS	Chr6	15109351	G-A	HET
SBS	Chr7	7440457	A-C	HET
SBS	Chr8	4642666	G-A	HET
SBS	Chr8	5025631	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os08g08680
SBS	Chr8	10214435	T-A	HET
SBS	Chr8	10214436	T-A	HET
SBS	Chr8	13948952	A-G	HET
SBS	Chr8	22811119	C-T	Homo
SBS	Chr8	25748565	A-G	Homo
SBS	Chr8	27641364	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os08g43740
SBS	Chr9	11068613	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os09g18050
SBS	Chr10	990174	C-T	Homo
SBS	Chr12	1799968	G-A	HET
SBS	Chr12	10746687	G-C	Homo
SBS	Chr12	11859323	T-A	Homo
SBS	Chr12	27258365	C-T	Homo

Deletions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	1044001	1179000	134999	20
Deletion	Chr9	1179848	1179849	1
Deletion	Chr4	5411085	5411086	1
Deletion	Chr7	8802799	8802800	1
Deletion	Chr6	10360001	10369000	8999	2
Deletion	Chr3	10559865	10559871	6
Deletion	Chr3	11117148	11117149	1
Deletion	Chr1	11868001	11897000	28999	3
Deletion	Chr3	13977001	13990000	12999	3
Deletion	Chr1	17056062	17056088	26	LOC_Os01g31190
Deletion	Chr10	18239001	18326000	86999	18
Deletion	Chr2	20419315	20419319	4
Deletion	Chr3	23522571	23522584	13

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr9	14829726	14829727	2
Insertion	Chr2	9367128	9367128	1
Insertion	Chr11	17738803	17738838	36

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	993854	1039769	LOC_Os10g02600
Inversion	Chr10	993873	1179233	LOC_Os10g02600
Inversion	Chr1	10154736	10841890
Inversion	Chr1	35468241	36422515	2
Inversion	Chr1	35479971	36422516	2

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	280809	Chr1	31723911	LOC_Os08g01430
Translocation	Chr12	2106829	Chr1	40851752
Translocation	Chr11	5104120	Chr6	16925180	2
Translocation	Chr7	6002713	Chr4	32327160	LOC_Os07g10950
Translocation	Chr6	9473710	Chr3	16475641	2
Translocation	Chr9	9555179	Chr1	11896727	LOC_Os09g15660
Translocation	Chr9	9555181	Chr1	11870647	LOC_Os09g15660
Translocation	Chr5	11423745	Chr4	9925175	LOC_Os05g19610
Translocation	Chr8	14049738	Chr5	7307262	2
Translocation	Chr11	16672450	Chr9	11543981	LOC_Os11g28770
Translocation	Chr6	16772295	Chr1	9693244
Translocation	Chr12	16808029	Chr9	4916618
Translocation	Chr11	28627443	Chr4	35224945
Translocation	Chr4	29209418	Chr2	24568877

Main menu