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Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	16596464	C-G	HET
SBS	Chr1	23138751	T-A	Homo
SBS	Chr1	24508979	C-A	Homo
SBS	Chr1	28601976	G-A	Homo
SBS	Chr1	32780263	A-G	Homo
SBS	Chr11	11930706	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g20570
SBS	Chr11	2215780	T-C	HET
SBS	Chr11	22365902	T-C	HET
SBS	Chr11	2698851	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g05820
SBS	Chr11	4541997	A-T	HET
SBS	Chr12	17777421	A-G	HET
SBS	Chr2	16499236	A-T	Homo
SBS	Chr2	24765575	T-A	HET
SBS	Chr2	29125688	T-C	HET
SBS	Chr2	7488957	G-C	HET
SBS	Chr3	20604446	T-C	Homo
SBS	Chr3	31269127	C-A	Homo	STOP_LOST	LOC_Os03g54990
SBS	Chr3	9675431	C-A	HET
SBS	Chr4	17347245	G-T	HET
SBS	Chr4	17347246	A-T	HET
SBS	Chr4	21061491	T-A	HET
SBS	Chr4	21061492	A-C	HET
SBS	Chr4	22267933	A-T	HET
SBS	Chr4	34335994	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g57670
SBS	Chr5	8926635	A-G	HET
SBS	Chr6	27893113	A-G	HET
SBS	Chr7	1546949	T-C	Homo
SBS	Chr7	23468904	G-C	HET
SBS	Chr7	25114541	T-G	Homo
SBS	Chr7	6185955	T-C	Homo
SBS	Chr9	17854692	C-T	HET
SBS	Chr9	17854693	C-T	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	1197129	1197135	6
Deletion	Chr12	3766405	3766413	8
Deletion	Chr7	5162666	5162671	5
Deletion	Chr8	6760515	6760516	1
Deletion	Chr9	13750392	13750393	1
Deletion	Chr10	14260976	14260986	10
Deletion	Chr1	14857427	14857444	17
Deletion	Chr4	20234533	20234535	2	LOC_Os04g33410
Deletion	Chr9	20764411	20764412	1	LOC_Os09g36060
Deletion	Chr11	23680985	23680990	5
Deletion	Chr1	32885020	32885022	2
Deletion	Chr1	38572422	38572426	4

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	15621383	15621384	2
Insertion	Chr5	11128475	11128475	1
Insertion	Chr7	23468619	23468619	1
Insertion	Chr8	18774974	18774977	4
Insertion	Chr9	2172054	2172054	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	3688885	3952420
Inversion	Chr11	3688893	3952433
Inversion	Chr2	27074286	27080976	2
Inversion	Chr2	27074362	27081585	2

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr2	18080007	Chr1	8155803
Translocation	Chr3	24196055	Chr2	27080978	2
Translocation	Chr3	24196058	Chr2	27081575	2

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