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Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11672561	G-A	Homo
SBS	Chr10	1760358	G-A	Homo
SBS	Chr10	1760359	C-T	Homo
SBS	Chr10	1760360	C-T	Homo
SBS	Chr11	17662531	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g30390
SBS	Chr11	20046708	A-G	HET
SBS	Chr11	23100920	G-C	HET
SBS	Chr11	3016767	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g06280
SBS	Chr12	25416669	A-G	Homo
SBS	Chr2	14493441	G-A	Homo
SBS	Chr2	15816257	C-T	Homo
SBS	Chr2	25089338	G-C	Homo
SBS	Chr2	26597010	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g44070
SBS	Chr2	3213027	G-A	HET
SBS	Chr2	32539212	C-T	HET
SBS	Chr3	14098540	A-T	HET
SBS	Chr3	15942948	T-A	HET
SBS	Chr3	32312070	G-A	Homo
SBS	Chr3	6593237	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os03g12470
SBS	Chr5	22276304	C-A	HET
SBS	Chr5	6603289	C-T	HET
SBS	Chr5	9582616	A-G	HET
SBS	Chr6	16270505	C-T	HET
SBS	Chr7	20488931	C-T	HET
SBS	Chr7	23443834	T-A	HET
SBS	Chr7	5076939	C-T	HET
SBS	Chr7	6515462	C-T	HET
SBS	Chr7	7924	A-T	HET
SBS	Chr8	13855477	G-A	HET
SBS	Chr8	27921541	G-A	HET
SBS	Chr9	11676667	T-G	HET
SBS	Chr9	1254066	C-T	Homo

Deletions: 25

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	5126965	5126981	16
Deletion	Chr8	5942048	5942049	1
Deletion	Chr5	6610961	6610963	2
Deletion	Chr5	7143416	7143417	1
Deletion	Chr6	8678877	8679329	452
Deletion	Chr1	8970699	8970700	1
Deletion	Chr11	9341614	9341619	5	LOC_Os11g16820
Deletion	Chr8	9512331	9512342	11
Deletion	Chr9	11067636	11067644	8
Deletion	Chr12	11090302	11090305	3
Deletion	Chr5	13565941	13565959	18	LOC_Os05g23650
Deletion	Chr9	14964106	14964109	3
Deletion	Chr3	15590401	15590421	20
Deletion	Chr10	16047062	16047063	1
Deletion	Chr7	16495622	16495629	7	LOC_Os07g28240
Deletion	Chr7	17256409	17256415	6
Deletion	Chr11	17596361	17596362	1
Deletion	Chr6	18082509	18082516	7
Deletion	Chr9	18295796	18295802	6
Deletion	Chr12	19615419	19615425	6
Deletion	Chr6	20773001	20814000	40999	6
Deletion	Chr12	21521741	21521742	1
Deletion	Chr1	23452055	23452058	3
Deletion	Chr4	29042214	29042247	33
Deletion	Chr4	31870252	31870253	1

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	19295064	19295065	2
Insertion	Chr4	28681129	28681132	4
Insertion	Chr9	9329742	9329743	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	3088428	3131906	2
Inversion	Chr12	3088431	3132186	LOC_Os12g06440

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	2005232	Chr6	23455128
Translocation	Chr12	3132186	Chr1	9201421	2
Translocation	Chr12	9657314	Chr2	24182559	LOC_Os12g16840
Translocation	Chr12	9657455	Chr2	24182598	LOC_Os12g16840
Translocation	Chr12	23092686	Chr5	29031984	2
Translocation	Chr12	23103207	Chr5	29031976	2

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