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Mutant Information

Variant Information

Single base substitutions: 42

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	8389398	C-T	Homo
SBS	Chr1	39209251	G-A	HET
SBS	Chr1	39761870	G-A	Homo
SBS	Chr2	3254118	A-G	HET
SBS	Chr2	7536336	G-T	HET
SBS	Chr2	7536338	T-A	HET
SBS	Chr2	11325149	G-C	HET
SBS	Chr2	33033127	T-A	HET
SBS	Chr3	13559330	C-T	Homo
SBS	Chr3	15107378	A-T	Homo
SBS	Chr3	15107379	C-T	Homo
SBS	Chr3	15107381	C-A	Homo
SBS	Chr3	22407202	G-A	HET
SBS	Chr3	28668746	G-A	HET
SBS	Chr3	28668747	A-T	HET
SBS	Chr4	3002231	G-C	Homo
SBS	Chr4	8934072	G-A	HET
SBS	Chr4	10578278	G-T	Homo
SBS	Chr5	8917523	T-A	HET
SBS	Chr6	326593	G-T	Homo
SBS	Chr6	326594	C-T	Homo
SBS	Chr6	4234191	G-C	HET
SBS	Chr6	16037536	C-T	HET
SBS	Chr7	7577293	G-A	Homo
SBS	Chr7	9633036	C-T	Homo
SBS	Chr7	11279535	C-T	Homo
SBS	Chr7	20923497	C-T	Homo
SBS	Chr8	1791463	G-T	Homo
SBS	Chr8	10599936	G-T	HET
SBS	Chr8	23425554	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g37070
SBS	Chr8	23563945	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g37280
SBS	Chr9	6510340	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os09g11670
SBS	Chr9	12615994	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g20950
SBS	Chr10	20074557	A-T	Homo
SBS	Chr10	21794525	C-T	HET
SBS	Chr11	15937699	C-A	Homo
SBS	Chr11	19201249	G-T	HET
SBS	Chr11	23057615	G-C	HET
SBS	Chr11	24032846	C-T	Homo
SBS	Chr12	10660835	C-A	HET
SBS	Chr12	15540992	G-A	HET
SBS	Chr12	19740441	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g32690

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	641171	641175	4
Deletion	Chr8	2636724	2636748	24
Deletion	Chr7	4689217	4689220	3
Deletion	Chr1	11452035	11452041	6
Deletion	Chr3	14761331	14761340	9
Deletion	Chr4	18499990	18499992	2
Deletion	Chr11	18593457	18593461	4
Deletion	Chr3	19142907	19142909	2
Deletion	Chr8	19381305	19381307	2
Deletion	Chr12	23503850	23503858	8
Deletion	Chr5	24473635	24473640	5	LOC_Os05g41795
Deletion	Chr11	26899998	26900010	12

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	43134513	43134518	6
Insertion	Chr3	2415879	2415880	2
Insertion	Chr11	18574261	18574263	3
Insertion	Chr11	21271984	21271985	2
Insertion	Chr2	15513158	15513168	11
Insertion	Chr5	5851224	5851224	1
Insertion	Chr6	6948495	6948495	1
Insertion	Chr7	28852138	28852147	10

No Inversion

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	2269757	Chr1	29863091	2
Translocation	Chr10	5484403	Chr2	14658145
Translocation	Chr9	8146703	Chr8	19798043	2
Translocation	Chr10	16936506	Chr6	1483415	2
Translocation	Chr4	32362353	Chr1	28849683	2
Translocation	Chr4	32362358	Chr1	28847579	LOC_Os04g54380

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