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Mutant Information

Variant Information

Single base substitutions: 35

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15873160	G-A	Homo
SBS	Chr1	17283634	G-T	Homo
SBS	Chr1	20509806	T-C	Homo
SBS	Chr1	27010153	T-A	HET
SBS	Chr1	27066501	A-G	HET
SBS	Chr10	11690893	T-G	HET
SBS	Chr10	1251050	C-A	HET
SBS	Chr10	13328037	A-G	HET
SBS	Chr10	19057634	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g35640
SBS	Chr11	11679980	G-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g20220
SBS	Chr11	15481445	A-G	HET
SBS	Chr11	16034828	C-T	Homo
SBS	Chr11	19351414	G-A	HET
SBS	Chr12	11857084	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g20300
SBS	Chr12	14555120	C-T	HET
SBS	Chr12	20831831	A-G	HET
SBS	Chr12	3738519	T-A	HET
SBS	Chr12	3738521	C-T	HET
SBS	Chr12	9118163	C-G	HET
SBS	Chr2	3293379	T-C	HET
SBS	Chr3	31679944	C-T	HET
SBS	Chr4	11371380	A-G	HET
SBS	Chr4	23666956	T-A	HET
SBS	Chr5	12726853	C-T	Homo
SBS	Chr6	29717888	G-A	Homo
SBS	Chr6	8590994	A-G	HET
SBS	Chr7	6789229	A-G	HET
SBS	Chr7	9750317	C-T	HET
SBS	Chr8	10271681	G-A	HET
SBS	Chr8	11532533	A-T	HET
SBS	Chr8	15109905	C-A	HET
SBS	Chr8	19479379	T-G	HET
SBS	Chr8	7950822	T-C	HET
SBS	Chr9	13838849	G-T	HET
SBS	Chr9	6698769	G-A	Homo

Deletions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	1021578	1021581	3
Deletion	Chr8	1108001	1134000	25999	5
Deletion	Chr4	1251001	1262000	10999	LOC_Os04g03050
Deletion	Chr5	4013813	4013814	1
Deletion	Chr5	5767347	5767370	23
Deletion	Chr2	11373006	11373007	1
Deletion	Chr1	18897049	18897055	6
Deletion	Chr3	19563274	19563739	465
Deletion	Chr9	20882927	20882929	2
Deletion	Chr3	21125977	21125983	6
Deletion	Chr4	28278665	28278880	215	LOC_Os04g47650
Deletion	Chr7	29328477	29328484	7
Deletion	Chr2	32681456	32681457	1

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	5943189	5943203	15	2
Insertion	Chr1	5943189	5943206	18	2
Insertion	Chr4	33337074	33337075	2

Inversions: 7

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	2395598	2811188
Inversion	Chr11	10384698	10703302
Inversion	Chr11	10740660	10915024	2
Inversion	Chr11	15142059	15376732	LOC_Os11g26440
Inversion	Chr11	15142074	15376743	LOC_Os11g26440
Inversion	Chr2	22164547	22349042	LOC_Os02g36740
Inversion	Chr2	22164567	22349062	LOC_Os02g36740

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	4126723	Chr10	10547348
Translocation	Chr4	7045570	Chr1	3245964	LOC_Os04g12744
Translocation	Chr12	7978421	Chr2	21243627	2
Translocation	Chr12	7980055	Chr2	2804228	2
Translocation	Chr10	9943240	Chr3	6999983
Translocation	Chr12	13553934	Chr10	17452279	2
Translocation	Chr8	13684518	Chr4	10213072	2
Translocation	Chr8	16797242	Chr4	21310224
Translocation	Chr10	17449092	Chr3	6999985	LOC_Os10g33250
Translocation	Chr10	17449828	Chr3	6999984	LOC_Os10g33250
Translocation	Chr5	22037232	Chr2	13963749
Translocation	Chr11	24439226	Chr5	21302442
Translocation	Chr12	26481687	Chr8	1130818	LOC_Os12g42610
Translocation	Chr11	28029263	Chr7	1128757

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