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Mutant Information

Variant Information

Single base substitutions: 36

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	10869289	C-T	HET	INTERGENIC
SBS	Chr1	11353995	G-A	HET	INTRON
SBS	Chr1	16156299	A-G	HET	INTERGENIC
SBS	Chr1	20715864	T-C	HOMO	INTRON
SBS	Chr1	22636512	G-A	HOMO	INTRON
SBS	Chr1	28575831	T-C	HOMO	UTR_3_PRIME
SBS	Chr10	1333187	C-T	HET	INTERGENIC
SBS	Chr10	15429347	T-C	HET	INTRON
SBS	Chr10	8230938	C-T	HET	INTERGENIC
SBS	Chr11	186303	C-G	HET	INTERGENIC
SBS	Chr11	19414581	G-A	HET	INTERGENIC
SBS	Chr11	8430313	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr12	18883405	T-A	HOMO	INTERGENIC
SBS	Chr12	18883406	C-A	HOMO	INTERGENIC
SBS	Chr12	662554	G-A	HET	INTERGENIC
SBS	Chr2	12881435	C-T	HOMO	INTERGENIC
SBS	Chr2	20891847	T-C	HOMO	INTERGENIC
SBS	Chr2	31616971	T-A	HET	INTERGENIC
SBS	Chr2	7240869	C-T	HET	INTERGENIC
SBS	Chr3	16142902	G-A	HET	INTERGENIC
SBS	Chr3	24047760	A-G	HET	INTERGENIC
SBS	Chr3	2893819	G-A	HOMO	INTERGENIC
SBS	Chr4	1396496	G-T	HET	INTERGENIC
SBS	Chr4	1396497	A-T	HET	INTERGENIC
SBS	Chr4	27069993	T-C	HET	INTERGENIC
SBS	Chr5	17558346	A-G	HET	INTERGENIC
SBS	Chr5	2004108	C-T	HOMO	INTERGENIC
SBS	Chr5	6875893	T-C	HET	INTERGENIC
SBS	Chr5	9274459	C-T	HET	INTERGENIC
SBS	Chr6	11062962	T-A	HET	INTERGENIC
SBS	Chr6	13803332	C-T	HET	INTERGENIC
SBS	Chr6	1424003	C-A	HET	SYNONYMOUS_CODING
SBS	Chr6	18280030	T-C	HET	INTERGENIC
SBS	Chr7	16300863	G-A	HOMO	INTERGENIC
SBS	Chr7	18516309	G-A	HOMO	INTERGENIC
SBS	Chr7	943725	A-T	HOMO	INTERGENIC

Deletions: 25

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	672136	672142	6
Deletion	Chr6	2625752	2625763	11
Deletion	Chr10	2846280	2846312	32
Deletion	Chr12	4520340	4520350	10
Deletion	Chr2	5929418	5929423	5
Deletion	Chr12	7375761	7375766	5
Deletion	Chr5	7723486	7723488	2
Deletion	Chr5	8236516	8236517	1
Deletion	Chr6	9268859	9268869	10
Deletion	Chr2	9417332	9417336	4
Deletion	Chr6	9701658	9701672	14
Deletion	Chr10	13195807	13195811	4
Deletion	Chr8	14054457	14054466	9
Deletion	Chr7	17787544	17787560	16
Deletion	Chr7	17941359	17941360	1
Deletion	Chr12	18868894	18868920	26
Deletion	Chr4	22188120	22188125	5
Deletion	Chr9	22539269	22539279	10	LOC_Os09g39220
Deletion	Chr2	24410995	24411000	5	LOC_Os02g40330
Deletion	Chr1	27306903	27306933	30	LOC_Os01g47740
Deletion	Chr4	27493258	27493288	30
Deletion	Chr1	30867013	30867048	35
Deletion	Chr2	32223953	32223954	1
Deletion	Chr1	34484052	34484080	28
Deletion	Chr1	41279530	41279538	8

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	3644733	3644734	2
Insertion	Chr7	29629256	29629257	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	24946021	25241627
Inversion	Chr11	25139484	25242292

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	24946029	Chr3	15697602
Translocation	Chr11	25139473	Chr3	15697597
Translocation	Chr11	25241629	Chr10	8018190	LOC_Os10g15270

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