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Mutant Information

Variant Information

Single base substitutions: 13

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr2	35235017	G-T	HET
SBS	Chr4	6745699	G-A	Homo
SBS	Chr4	10922429	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g19610
SBS	Chr6	5422603	T-C	HET
SBS	Chr6	8142384	A-G	HET
SBS	Chr6	27083046	G-A	HET
SBS	Chr7	12499663	C-T	Homo
SBS	Chr7	24724476	T-G	HET
SBS	Chr8	23711665	C-T	HET
SBS	Chr9	18504681	T-C	HET
SBS	Chr10	3138978	C-T	Homo
SBS	Chr10	8710310	C-T	HET
SBS	Chr11	9756293	G-A	HET

Deletions: 24

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	2722884	2722909	25
Deletion	Chr4	3350476	3350499	23
Deletion	Chr9	4751314	4751315	1	LOC_Os09g08930
Deletion	Chr4	5548338	5548339	1	LOC_Os04g10270
Deletion	Chr1	8466096	8466103	7
Deletion	Chr5	9514456	9514457	1
Deletion	Chr11	9626681	9626687	6
Deletion	Chr8	10993610	10993617	7	LOC_Os08g17920
Deletion	Chr7	12154422	12154423	1
Deletion	Chr2	13705399	13705554	155
Deletion	Chr10	14374635	14374641	6
Deletion	Chr10	14374939	14374998	59
Deletion	Chr6	14715432	14715433	1
Deletion	Chr11	20227323	20228175	852
Deletion	Chr12	20240099	20240100	1
Deletion	Chr5	20357940	20357941	1
Deletion	Chr5	20839914	20839915	1	LOC_Os05g35100
Deletion	Chr11	21125157	21125158	1
Deletion	Chr1	22329000	22329001	1
Deletion	Chr11	22931782	22931859	77
Deletion	Chr12	24587178	24587193	15
Deletion	Chr4	25266320	25266321	1
Deletion	Chr6	29241252	29241253	1
Deletion	Chr1	36847121	36847122	1	LOC_Os01g63550

Insertions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr4	2356291	2356291	1
Insertion	Chr4	3904617	3904617	1
Insertion	Chr4	4025001	4025001	1
Insertion	Chr4	14592733	14592737	5
Insertion	Chr5	6127134	6127134	1
Insertion	Chr5	9941976	9941976	1
Insertion	Chr5	17611700	17611700	1	LOC_Os05g30380
Insertion	Chr7	6154870	6154908	39
Insertion	Chr7	19676771	19676771	1
Insertion	Chr9	17230360	17230380	21
Insertion	Chr11	7848733	7848733	1
Insertion	Chr11	16554568	16554569	2
Insertion	Chr11	21129520	21129525	6
Insertion	Chr11	22104942	22104946	5
Insertion	Chr12	21982395	21982395	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	13458080	13459179	LOC_Os03g23250

Translocations: 22

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	2491038	Chr5	25142919
Translocation	Chr6	3477596	Chr1	10061967	2
Translocation	Chr6	3785012	Chr2	18527160	2
Translocation	Chr3	5698974	Chr1	2830037	2
Translocation	Chr8	7726574	Chr1	31258094
Translocation	Chr6	8210752	Chr4	2172581	2
Translocation	Chr9	9371639	Chr7	4204682
Translocation	Chr9	9765905	Chr2	6850978
Translocation	Chr4	10606643	Chr3	16913402	2
Translocation	Chr8	10828772	Chr4	21079415
Translocation	Chr12	12854405	Chr3	14907122
Translocation	Chr6	13546816	Chr4	3152703	2
Translocation	Chr12	15647896	Chr10	11437864
Translocation	Chr12	17508010	Chr7	11859468
Translocation	Chr4	19119507	Chr2	22665667
Translocation	Chr5	19194271	Chr3	12619943	LOC_Os05g32770
Translocation	Chr10	21248873	Chr5	1803497
Translocation	Chr9	21552316	Chr2	34253057	LOC_Os09g37310
Translocation	Chr7	21659664	Chr1	35235637
Translocation	Chr7	22812934	Chr1	293787	2
Translocation	Chr12	23132351	Chr2	691366	2
Translocation	Chr3	29761886	Chr1	9052694

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