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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15265143	G-A	HET
SBS	Chr1	18489953	G-T	HET
SBS	Chr1	22335390	A-T	HET
SBS	Chr10	9486221	A-T	Homo	STOP_GAINED	LOC_Os10g18670
SBS	Chr11	15482686	C-T	HET
SBS	Chr11	20393316	G-A	Homo
SBS	Chr11	24896018	C-G	HET
SBS	Chr2	20551531	C-T	HET
SBS	Chr2	23430623	G-A	HET
SBS	Chr2	2496433	G-A	HET
SBS	Chr2	9616135	A-C	HET
SBS	Chr3	35663492	G-A	HET
SBS	Chr4	34029978	G-A	HET
SBS	Chr5	23410154	T-A	Homo
SBS	Chr5	23410155	T-A	Homo
SBS	Chr5	26607672	T-A	Homo
SBS	Chr5	2755797	C-A	Homo
SBS	Chr7	1458484	G-A	HET
SBS	Chr7	3110638	G-A	HET
SBS	Chr7	4451938	A-T	HET
SBS	Chr7	4843089	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g09240
SBS	Chr8	10854359	C-T	HET
SBS	Chr8	16272189	C-T	HET
SBS	Chr8	8046584	A-T	HET
SBS	Chr9	17088643	G-A	Homo

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	1777235	1777241	6
Deletion	Chr5	2502683	2502687	4
Deletion	Chr12	2687706	2687728	22
Deletion	Chr2	3675316	3675317	1
Deletion	Chr1	3820026	3820027	1
Deletion	Chr12	4755501	4755512	11
Deletion	Chr1	8802520	8802522	2
Deletion	Chr11	8851179	8851197	18
Deletion	Chr9	9132698	9132704	6
Deletion	Chr2	9167667	9167683	16
Deletion	Chr1	9518664	9518673	9
Deletion	Chr1	10221489	10221494	5
Deletion	Chr5	13267001	13274000	6999	LOC_Os05g23250
Deletion	Chr5	13543001	13577000	33999	4
Deletion	Chr10	14894550	14894552	2
Deletion	Chr3	16281509	16281520	11
Deletion	Chr1	17397979	17397981	2
Deletion	Chr1	18049631	18049637	6
Deletion	Chr11	18174203	18174204	1	LOC_Os11g31190
Deletion	Chr3	18713194	18713205	11
Deletion	Chr8	19199237	19199238	1
Deletion	Chr9	20775167	20775168	1	LOC_Os09g36080
Deletion	Chr7	20939429	20939431	2
Deletion	Chr1	21375879	21375885	6
Deletion	Chr6	21643683	21643686	3
Deletion	Chr5	23969243	23969244	1	LOC_Os05g40870
Deletion	Chr5	24855337	24855343	6
Deletion	Chr3	25626471	25626472	1	LOC_Os03g45390
Deletion	Chr5	25971828	25971840	12	LOC_Os05g44650
Deletion	Chr12	26132405	26132419	14
Deletion	Chr2	27362289	27362305	16
Deletion	Chr2	33039001	33209000	169999	19
Deletion	Chr3	36310593	36310595	2
Deletion	Chr1	38733470	38733474	4	LOC_Os01g66680

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	13621846	13621871	26
Insertion	Chr10	1516455	1516457	3	LOC_Os10g03510
Insertion	Chr10	17998445	17998470	26
Insertion	Chr2	34845898	34845899	2
Insertion	Chr3	4334828	4334830	3
Insertion	Chr5	29482315	29482316	2

No Inversion

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	4714462	Chr3	35255316	LOC_Os08g08240
Translocation	Chr8	4714485	Chr3	35195681	2
Translocation	Chr12	5460989	Chr3	32963678	2
Translocation	Chr11	16320956	Chr2	21550609	2
Translocation	Chr11	16323499	Chr2	21550673	2
Translocation	Chr2	33141695	Chr1	9117592	LOC_Os02g54100
Translocation	Chr2	33157305	Chr1	9117575

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