Search Results

Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	7659514	G-A	Homo
SBS	Chr1	7659520	G-T	Homo
SBS	Chr2	697555	C-T	HET
SBS	Chr2	11376483	A-G	HET
SBS	Chr2	22513331	T-G	HET
SBS	Chr2	31524656	G-A	HET
SBS	Chr2	31524657	C-A	HET
SBS	Chr3	2033361	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g04410
SBS	Chr3	10727368	C-T	HET
SBS	Chr3	13565552	A-C	HET
SBS	Chr4	1315496	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g03150
SBS	Chr4	18441882	A-C	HET
SBS	Chr4	24738959	T-C	HET
SBS	Chr5	17930218	C-G	HET
SBS	Chr5	28039638	A-G	HET
SBS	Chr6	1087364	T-C	HET
SBS	Chr7	15301851	T-A	Homo
SBS	Chr7	22207314	C-T	HET
SBS	Chr8	21409784	G-T	HET
SBS	Chr9	4719572	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os09g08900
SBS	Chr9	4763532	G-A	HET
SBS	Chr9	6740123	A-G	HET
SBS	Chr9	12359200	G-T	HET
SBS	Chr9	21436017	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os09g37160
SBS	Chr10	4021868	C-T	HET
SBS	Chr10	7988300	T-C	HET
SBS	Chr11	13234640	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g23010
SBS	Chr11	16285235	A-G	Homo
SBS	Chr11	22839130	C-T	Homo
SBS	Chr12	9400635	C-T	HET
SBS	Chr12	16518793	G-T	HET
SBS	Chr12	23779575	G-A	HET

Deletions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	1751001	1779000	27999	3
Deletion	Chr10	2008495	2008502	7
Deletion	Chr8	5173001	5260000	86999	17
Deletion	Chr1	5927528	5927536	8
Deletion	Chr6	9413498	9413504	6
Deletion	Chr9	12884436	12884458	22
Deletion	Chr2	14035394	14035399	5
Deletion	Chr8	16669653	16669655	2
Deletion	Chr9	21536093	21536098	5

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr5	14140895	14140896	2
Insertion	Chr7	2153248	2153248	1
Insertion	Chr10	8976156	8976157	2
Insertion	Chr4	34971512	34971513	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	16850859	16878799
Inversion	Chr2	30994783	31523002	2
Inversion	Chr2	30994822	31523053	2

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	2321509	Chr4	12931326	LOC_Os09g04384
Translocation	Chr10	9076229	Chr6	16342046
Translocation	Chr8	9824879	Chr3	19470834	2
Translocation	Chr8	9825882	Chr3	26579317	LOC_Os08g16120
Translocation	Chr6	10117993	Chr5	21218472
Translocation	Chr8	16304112	Chr1	10794260
Translocation	Chr9	18927643	Chr8	5176650
Translocation	Chr7	20402927	Chr6	29925130
Translocation	Chr12	21962545	Chr1	11341442
Translocation	Chr11	23537182	Chr8	24436817
Translocation	Chr11	23537195	Chr8	24436147
Translocation	Chr3	29194570	Chr1	31269208

Main menu