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Mutant Information

Variant Information

Single base substitutions: 45

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14385316	G-A	HET
SBS	Chr1	17402691	G-T	HET
SBS	Chr1	25912839	G-A	HET
SBS	Chr1	32736183	T-A	Homo
SBS	Chr10	21809515	T-A	Homo
SBS	Chr10	4449157	A-G	Homo
SBS	Chr10	6180042	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os10g11150
SBS	Chr11	10378174	G-A	Homo
SBS	Chr11	16022385	G-C	HET
SBS	Chr11	16666382	G-A	Homo
SBS	Chr11	24425867	C-T	HET
SBS	Chr12	10360658	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g18020
SBS	Chr12	10360659	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g18020
SBS	Chr12	12932499	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g22900
SBS	Chr12	17918591	T-C	HET
SBS	Chr12	18055289	A-C	HET
SBS	Chr2	31686103	C-A	Homo
SBS	Chr3	12731563	C-T	HET
SBS	Chr3	34040200	C-G	Homo
SBS	Chr4	10793293	C-T	HET
SBS	Chr4	11108056	A-C	HET
SBS	Chr4	11573193	A-G	HET
SBS	Chr4	23381239	G-A	Homo
SBS	Chr4	9958561	T-A	Homo
SBS	Chr5	20730174	G-A	HET
SBS	Chr5	29060364	G-A	Homo
SBS	Chr5	5154448	C-A	HET
SBS	Chr6	19879906	T-C	Homo
SBS	Chr6	24186822	T-C	HET
SBS	Chr6	30633961	C-T	HET
SBS	Chr6	6632098	A-C	Homo
SBS	Chr6	8466900	T-A	Homo
SBS	Chr7	19991110	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os07g33450
SBS	Chr7	29309249	T-G	Homo
SBS	Chr8	11002016	G-A	Homo
SBS	Chr8	17598255	G-A	Homo
SBS	Chr8	20417541	T-G	Homo
SBS	Chr8	20632635	C-A	Homo
SBS	Chr8	25725934	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os08g40640
SBS	Chr8	341716	C-T	HET
SBS	Chr8	362352	A-G	HET
SBS	Chr8	7170581	C-T	Homo
SBS	Chr8	8639570	G-T	HET	STOP_GAINED	LOC_Os08g14400
SBS	Chr8	9601011	G-A	Homo
SBS	Chr9	7323076	G-T	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	3563700	3563706	6
Deletion	Chr12	4112428	4112432	4	LOC_Os12g08080
Deletion	Chr4	4446136	4446138	2
Deletion	Chr10	7145144	7145145	1
Deletion	Chr5	9390192	9390198	6
Deletion	Chr7	11399654	11399830	176	LOC_Os07g19250
Deletion	Chr10	13292366	13292368	2
Deletion	Chr2	14111674	14111675	1	LOC_Os02g24320
Deletion	Chr7	14450990	14450994	4
Deletion	Chr3	14939248	14939258	10
Deletion	Chr10	21496209	21496210	1	LOC_Os10g40150
Deletion	Chr8	22710473	22710474	1
Deletion	Chr6	23195748	23195749	1
Deletion	Chr2	27363973	27363974	1
Deletion	Chr1	29650284	29650481	197

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	17738803	17738838	36

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	381995	403575

Translocations: 13

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	141191	Chr2	17016428
Translocation	Chr8	5655158	Chr2	32711057	2
Translocation	Chr10	5720401	Chr2	24465250	2
Translocation	Chr7	6846381	Chr1	27664998	2
Translocation	Chr12	9725387	Chr4	7738320
Translocation	Chr12	9725505	Chr4	10817575
Translocation	Chr4	12889587	Chr2	23217137	2
Translocation	Chr8	16721146	Chr7	13809015	LOC_Os08g27390
Translocation	Chr9	18194808	Chr1	42826768	2
Translocation	Chr9	18195006	Chr1	42826751	2
Translocation	Chr9	20408203	Chr3	5235471
Translocation	Chr8	20646306	Chr1	31200447
Translocation	Chr8	25068578	Chr6	19289158

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