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Mutant Information

Variant Information

Single base substitutions: 35

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	7122019	A-G	HET
SBS	Chr1	19872276	C-A	HET
SBS	Chr1	21293578	A-C	HET
SBS	Chr1	24398288	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g42880
SBS	Chr1	24685316	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g43210
SBS	Chr1	38540972	C-T	Homo
SBS	Chr2	6326310	G-A	HET
SBS	Chr2	6326315	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os02g12170
SBS	Chr2	6326316	G-A	HET
SBS	Chr2	8056332	C-A	HET
SBS	Chr2	9204593	C-T	HET
SBS	Chr2	21066956	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g35100
SBS	Chr2	22735465	A-G	Homo
SBS	Chr2	23911951	A-G	Homo
SBS	Chr3	18563174	G-A	HET
SBS	Chr3	31648651	C-A	Homo
SBS	Chr3	33909700	G-A	HET
SBS	Chr4	11729452	C-A	HET
SBS	Chr4	13703013	A-T	HET
SBS	Chr4	24252112	C-T	HET
SBS	Chr5	4870551	T-A	HET
SBS	Chr5	6750721	C-T	HET
SBS	Chr5	8266222	T-A	HET
SBS	Chr5	23203846	C-A	Homo
SBS	Chr7	8297674	C-T	HET
SBS	Chr8	4262736	T-A	HET
SBS	Chr10	20638794	C-T	Homo
SBS	Chr11	5092915	C-T	Homo
SBS	Chr11	10425468	C-T	Homo
SBS	Chr11	19098131	T-C	HET
SBS	Chr11	19098140	G-T	HET
SBS	Chr12	801612	G-A	Homo
SBS	Chr12	15283854	T-C	HET
SBS	Chr12	17859785	A-G	Homo
SBS	Chr12	22316286	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os12g36470

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	241019	241036	17	LOC_Os05g01410
Deletion	Chr7	400637	400648	11
Deletion	Chr7	2529218	2529221	3
Deletion	Chr2	2895543	2895545	2
Deletion	Chr9	6231609	6231610	1
Deletion	Chr8	7764452	7764453	1
Deletion	Chr12	8020333	8020335	2
Deletion	Chr9	9890609	9890611	2
Deletion	Chr10	12086772	12086785	13
Deletion	Chr7	12339001	12375000	35999	8
Deletion	Chr7	15366300	15366307	7
Deletion	Chr6	16025100	16025116	16
Deletion	Chr1	17126034	17126036	2
Deletion	Chr2	17248532	17248535	3
Deletion	Chr12	18796932	18796934	2
Deletion	Chr4	19561429	19561434	5
Deletion	Chr2	19597354	19597355	1
Deletion	Chr2	22326308	22326309	1
Deletion	Chr2	24970882	24970894	12
Deletion	Chr7	25584935	25584936	1
Deletion	Chr3	34016106	34016107	1

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr2	186668	186669	2
Insertion	Chr3	2292369	2292370	2
Insertion	Chr3	29320960	29320962	3

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	8372673	8597044

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	8590976	Chr1	19783360	2
Translocation	Chr10	15340524	Chr3	8372684	LOC_Os10g29530
Translocation	Chr5	19190131	Chr4	13832267
Translocation	Chr7	21751667	Chr1	29849101
Translocation	Chr7	21906349	Chr1	29849103	LOC_Os07g36610
Translocation	Chr6	27901912	Chr1	23519543

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