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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	26620390	C-T	HET
SBS	Chr10	4233371	A-G	HET
SBS	Chr10	5710893	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g10390
SBS	Chr11	791449	C-T	HET
SBS	Chr12	11174182	C-T	HET
SBS	Chr2	23807078	G-C	Homo
SBS	Chr3	28021662	C-A	HET
SBS	Chr3	29037285	C-T	HET
SBS	Chr3	8311435	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os03g15190
SBS	Chr4	17392719	T-C	HET
SBS	Chr4	18449659	G-A	HET
SBS	Chr4	19985166	T-C	HET
SBS	Chr4	7978970	A-G	HET
SBS	Chr5	12498633	C-T	HET
SBS	Chr5	13089852	T-C	Homo
SBS	Chr5	23475654	A-G	HET
SBS	Chr5	27184457	G-C	HET
SBS	Chr6	15721762	A-G	HET
SBS	Chr6	21231560	T-C	HET
SBS	Chr7	13137874	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g23300
SBS	Chr7	20079796	A-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g33610
SBS	Chr7	24192114	T-A	Homo
SBS	Chr7	8149815	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g14290
SBS	Chr8	3320666	T-C	HET

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	203325	203332	7
Deletion	Chr2	2946015	2946018	3	LOC_Os02g05930
Deletion	Chr12	3637197	3637201	4	LOC_Os12g07380
Deletion	Chr8	4572170	4572172	2
Deletion	Chr7	4668874	4668878	4
Deletion	Chr1	4822534	4822535	1
Deletion	Chr5	5596547	5596570	23
Deletion	Chr6	8932264	8932266	2
Deletion	Chr5	11339920	11339924	4
Deletion	Chr4	17432001	17534000	101999	12
Deletion	Chr4	17536001	17545000	8999	3
Deletion	Chr5	22811600	22811615	15
Deletion	Chr8	23202375	23202376	1
Deletion	Chr2	33059367	33059389	22

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	4060855	4060858	4
Insertion	Chr12	21760212	21760213	2
Insertion	Chr12	228150	228151	2
Insertion	Chr3	31150166	31150167	2
Insertion	Chr6	19500373	19500374	2
Insertion	Chr8	18376583	18376584	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	15257581	15831835	2

Translocations: 9

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	790715	Chr3	22091141
Translocation	Chr11	790723	Chr3	22091158
Translocation	Chr6	10878727	Chr4	18050982
Translocation	Chr6	10879197	Chr4	18050992
Translocation	Chr4	16361709	Chr1	26434325	2
Translocation	Chr4	16365315	Chr1	26434315	2
Translocation	Chr6	21576302	Chr1	15444216	LOC_Os06g36690
Translocation	Chr4	24606587	Chr2	31139330
Translocation	Chr4	24606599	Chr2	31151331	2

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