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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1746804	T-C	HET
SBS	Chr1	22444877	G-A	HET
SBS	Chr1	22540510	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g39970
SBS	Chr1	31055473	T-A	HET
SBS	Chr1	33184846	A-C	HET
SBS	Chr1	33184847	C-A	HET
SBS	Chr11	17857335	C-A	HET
SBS	Chr12	13419835	G-T	Homo
SBS	Chr2	15071229	T-A	Homo
SBS	Chr2	17794607	A-T	Homo
SBS	Chr2	26534265	T-A	Homo
SBS	Chr2	29234615	T-G	HET
SBS	Chr2	29234616	A-G	HET
SBS	Chr2	34845313	A-T	HET
SBS	Chr3	18187881	T-C	HET
SBS	Chr3	2029564	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g04410
SBS	Chr3	8957800	T-A	HET
SBS	Chr4	13597933	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g23780
SBS	Chr4	16963265	C-T	Homo
SBS	Chr4	2203218	G-A	HET
SBS	Chr4	32994259	T-C	HET
SBS	Chr4	6766402	C-T	HET
SBS	Chr5	15329812	G-C	HET
SBS	Chr7	25567127	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g42700
SBS	Chr7	27107021	G-T	Homo
SBS	Chr8	12237964	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os08g20370
SBS	Chr8	18655787	C-A	HET
SBS	Chr8	18750336	C-T	HET

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	2072260	2072266	6
Deletion	Chr1	4586435	4586447	12
Deletion	Chr5	4655731	4655733	2
Deletion	Chr10	8695763	8695766	3
Deletion	Chr2	9691088	9691101	13
Deletion	Chr10	12862001	12889000	26999	4
Deletion	Chr10	12893001	12903000	9999	2
Deletion	Chr6	13237605	13237629	24
Deletion	Chr12	15302989	15302997	8
Deletion	Chr5	16699460	16699470	10	LOC_Os05g28510
Deletion	Chr5	16771697	16771709	12
Deletion	Chr4	16855001	17003000	147999	22
Deletion	Chr4	17012001	17142000	129999	22
Deletion	Chr3	17128028	17128035	7
Deletion	Chr4	17144001	17204000	59999	10
Deletion	Chr4	17209001	17288000	78999	10
Deletion	Chr4	17301001	17353000	51999	8
Deletion	Chr9	18654825	18654826	1	LOC_Os09g30970
Deletion	Chr8	19188963	19188965	2
Deletion	Chr10	20342042	20342043	1
Deletion	Chr1	20661240	20661241	1
Deletion	Chr1	21990503	21990506	3
Deletion	Chr4	33921022	33921024	2

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	11307413	11307414	2
Insertion	Chr2	28613381	28613382	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	4052027	4749329	LOC_Os10g07548
Inversion	Chr10	4052045	4749329	LOC_Os10g07548

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	8221307	Chr4	3485781	2

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