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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	936455	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g02730
SBS	Chr1	7999320	T-G	HET
SBS	Chr1	20255725	T-A	Homo
SBS	Chr1	26560679	A-T	Homo
SBS	Chr1	29501238	C-T	HET
SBS	Chr1	36523333	G-A	Homo
SBS	Chr3	894312	A-G	Homo
SBS	Chr3	3578178	C-T	Homo
SBS	Chr3	13548236	G-C	HET
SBS	Chr3	24708985	G-A	HET
SBS	Chr5	1714082	A-C	HET
SBS	Chr5	28089756	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g48970
SBS	Chr6	20179934	G-A	Homo
SBS	Chr7	6368225	C-G	Homo
SBS	Chr7	9742697	G-A	HET
SBS	Chr8	8147073	T-A	HET
SBS	Chr8	8147074	C-A	HET
SBS	Chr8	22955857	C-A	HET
SBS	Chr8	23039972	C-T	HET
SBS	Chr9	2520588	G-T	Homo
SBS	Chr9	18333646	T-C	HET
SBS	Chr9	21452667	T-A	HET
SBS	Chr10	4677287	C-T	HET
SBS	Chr12	5480418	A-T	Homo
SBS	Chr12	22920562	T-A	HET

Deletions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	4548001	4565000	16999	2
Deletion	Chr10	4570001	4615000	44999	10
Deletion	Chr10	4617001	4671000	53999	8
Deletion	Chr7	10370056	10370058	2
Deletion	Chr6	23859099	23859102	3
Deletion	Chr4	28684180	28684189	9

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	1939317	1939318	2
Insertion	Chr12	16895887	16895887	1
Insertion	Chr8	20422635	20422682	48
Insertion	Chr8	27322463	27322465	3

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	14534925	14548971
Inversion	Chr6	20166930	20867945	LOC_Os06g34700
Inversion	Chr6	20166932	20867946	LOC_Os06g34700
Inversion	Chr9	20371904	21041892	LOC_Os09g34970
Inversion	Chr9	20371921	20709501	LOC_Os09g34970
Inversion	Chr9	22490226	22569732	2

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr2	2071625	Chr1	1500224	2
Translocation	Chr11	3249898	Chr1	2526173	LOC_Os11g06670
Translocation	Chr12	3822317	Chr11	18402914
Translocation	Chr7	3933190	Chr4	3728995	2
Translocation	Chr10	4544832	Chr5	6582990
Translocation	Chr10	4547813	Chr5	6582984
Translocation	Chr8	6733734	Chr6	7387691
Translocation	Chr8	7289747	Chr5	11351902	2
Translocation	Chr6	7675089	Chr1	13433176
Translocation	Chr6	7675099	Chr1	13514141
Translocation	Chr10	9004510	Chr9	21999731
Translocation	Chr10	9004520	Chr9	21452571	2
Translocation	Chr11	14501284	Chr2	2772700	2
Translocation	Chr6	20980883	Chr1	12463589	2

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