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Mutant Information

Mutant NameFN2383 [Download]
GenerationM2
Genus SpeciesOryza Sativa
CultivarKitaake
Alignment File (BAM File)Download FN2383 Alignment File
Seed AvailabilityYes [Order Seeds]
Mapping
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Variant Information

Single base substitutions: 26
Variant Type Chromosome Position Change Genotype Effect Gene Affected
SBSChr133432004C-GHETNON_SYNONYMOUS_CODINGLOC_Os01g57800
SBSChr137805839G-CHomo
SBSChr1015600127G-AHET
SBSChr1021058409T-CHET
SBSChr1122086456C-GHET
SBSChr115743622T-AHET
SBSChr1224272538C-THET
SBSChr231384295G-AHET
SBSChr232323847G-AHET
SBSChr234469054C-GHET
SBSChr235351021A-THET
SBSChr27650374A-THET
SBSChr318197693G-THET
SBSChr336285174C-THET
SBSChr36432302A-GHET
SBSChr421923802C-THomoNON_SYNONYMOUS_CODINGLOC_Os04g35960
SBSChr430463901A-THET
SBSChr518850878G-AHomo
SBSChr619670078C-AHET
SBSChr62251654C-THET
SBSChr629004765G-AHomo
SBSChr629005896A-GHomo
SBSChr711204872G-AHETNON_SYNONYMOUS_CODINGLOC_Os07g18910
SBSChr814416853C-GHET
SBSChr83715041C-THETNON_SYNONYMOUS_CODINGLOC_Os08g06580
SBSChr84879379G-THET

Deletions: 11
Variant Type Chromosome Start End Size (bp) Number of Genes
DeletionChr42441001263100018999925
DeletionChr9282020828202091
DeletionChr4513889151388921
DeletionChr2701654470165484
DeletionChr3887771588777161
DeletionChr1014417234144172395
DeletionChr415020181150201821
DeletionChr7247910102479102313
DeletionChr824895155248951583
DeletionChr525793859257938601
DeletionChr126807406268074071

Insertions: 2
Variant Type Chromosome Start End Size (bp) Number of Genes
InsertionChr228788277287882782
InsertionChr7412457341245742

No Inversion

Translocations: 7
Variant Type Chromosome Position 1 Chromosome Position 2 Number of Genes
TranslocationChr7223061Chr4320656122
TranslocationChr97836052Chr510185767
TranslocationChr1113710946Chr213607853
TranslocationChr1114502016Chr266295182
TranslocationChr616817203Chr129886771
TranslocationChr417228510Chr3267618772
TranslocationChr226568590Chr14970615