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Mutant Information

SOS indicates the sequenced line is sterile and seeds from siblings are available.

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11598320	C-A	HET
SBS	Chr1	29682618	G-T	Homo
SBS	Chr1	42335701	T-A	Homo
SBS	Chr1	42779797	T-C	HET
SBS	Chr11	13324418	C-T	Homo
SBS	Chr11	23474691	G-T	HET
SBS	Chr11	26652508	T-G	HET
SBS	Chr11	5818354	C-A	HET
SBS	Chr12	3020691	T-C	HET
SBS	Chr3	14346391	T-G	Homo
SBS	Chr3	5256568	T-A	Homo
SBS	Chr4	33274544	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g55879
SBS	Chr4	4908996	G-A	HET
SBS	Chr4	7265151	C-T	Homo
SBS	Chr5	8235467	T-G	HET
SBS	Chr6	13595830	T-G	HET
SBS	Chr6	27210733	T-C	HET
SBS	Chr6	3400919	A-G	HET
SBS	Chr6	3418579	T-G	HET
SBS	Chr6	3418581	G-T	HET
SBS	Chr6	5390319	G-T	HET
SBS	Chr7	5514669	T-C	Homo
SBS	Chr7	7405791	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os07g12900
SBS	Chr8	12795536	G-A	HET
SBS	Chr8	13237687	C-A	Homo
SBS	Chr8	22424079	G-C	HET
SBS	Chr8	25008309	G-A	HET
SBS	Chr8	25008310	C-A	HET
SBS	Chr8	25014336	T-A	HET

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	4380150	4380152	2
Deletion	Chr3	5240163	5240180	17
Deletion	Chr8	10442465	10442466	1	LOC_Os08g17040
Deletion	Chr4	10970414	10970415	1	LOC_Os04g19660
Deletion	Chr12	13181274	13181278	4
Deletion	Chr4	16981874	16981877	3
Deletion	Chr10	19649698	19649700	2
Deletion	Chr1	23070308	23070310	2
Deletion	Chr8	23734149	23734166	17
Deletion	Chr4	25669734	25669737	3
Deletion	Chr1	26107736	26107741	5
Deletion	Chr1	28761533	28761534	1
Deletion	Chr3	28811875	28811881	6
Deletion	Chr1	30856251	30856274	23

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	34770242	34770244	3
Insertion	Chr4	11739351	11739404	54
Insertion	Chr5	29923277	29923278	2

No Inversion

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	14013265	Chr4	10970908	2
Translocation	Chr11	26207283	Chr2	30805330
Translocation	Chr12	26966677	Chr6	4303675

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