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Mutant Information

Variant Information

Single base substitutions: 45

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	19283136	G-A	HET
SBS	Chr1	24672291	C-T	HET
SBS	Chr1	28305639	G-A	Homo
SBS	Chr1	36778035	G-T	HET
SBS	Chr1	42353115	G-A	Homo
SBS	Chr10	15959652	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g30660
SBS	Chr11	19999424	C-G	Homo
SBS	Chr11	3155859	T-A	Homo
SBS	Chr11	5161327	A-G	HET
SBS	Chr12	21565802	G-T	Homo
SBS	Chr12	23425329	T-A	HET
SBS	Chr12	26429925	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os12g42550
SBS	Chr12	3879043	G-A	HET
SBS	Chr12	4063143	C-T	HET	STOP_GAINED	LOC_Os12g08000
SBS	Chr2	12927634	A-G	Homo
SBS	Chr2	14763043	G-A	Homo
SBS	Chr3	32309582	C-T	HET
SBS	Chr4	11362765	C-A	HET
SBS	Chr4	33664788	T-C	HET
SBS	Chr4	486488	T-C	HET
SBS	Chr4	8527832	A-T	HET
SBS	Chr5	23226998	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g39570
SBS	Chr5	2390137	C-T	HET
SBS	Chr5	24830000	T-C	HET
SBS	Chr5	28077225	T-G	Homo
SBS	Chr5	29004962	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g50600
SBS	Chr5	7461658	C-T	HET
SBS	Chr5	7663366	G-A	Homo
SBS	Chr5	9420248	G-A	HET
SBS	Chr6	13158505	A-G	HET
SBS	Chr6	26957564	T-C	HET
SBS	Chr6	4885459	T-C	HET
SBS	Chr7	26835789	G-A	HET
SBS	Chr7	299283	C-A	HET
SBS	Chr7	6904992	A-C	Homo
SBS	Chr7	7594349	G-A	Homo
SBS	Chr7	9706624	C-T	HET
SBS	Chr8	12007088	T-C	Homo
SBS	Chr8	22119558	A-T	Homo
SBS	Chr8	23515409	G-A	HET
SBS	Chr8	25170172	G-A	HET
SBS	Chr8	7827670	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g13170
SBS	Chr8	9842165	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g16140
SBS	Chr9	21198620	G-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g36740
SBS	Chr9	3678259	G-C	Homo

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1341378	1341382	4
Deletion	Chr9	2744297	2744298	1	LOC_Os09g05110
Deletion	Chr10	3008256	3008260	4
Deletion	Chr10	7954504	7954507	3
Deletion	Chr9	14558011	14558012	1
Deletion	Chr5	16990018	16990019	1	LOC_Os05g28980
Deletion	Chr11	18042001	18124000	81999	11
Deletion	Chr5	19194846	19194847	1
Deletion	Chr6	20899287	20899291	4
Deletion	Chr12	21267338	21267342	4
Deletion	Chr3	22865538	22865539	1
Deletion	Chr8	24127617	24127621	4
Deletion	Chr8	25041575	25041578	3
Deletion	Chr3	29631530	29631535	5

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	18119089	18119090	2
Insertion	Chr8	18424274	18424295	22	LOC_Os08g29990

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	12755519	13180821	2
Inversion	Chr4	12755527	13180831	2

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	11862818	Chr2	20528926	LOC_Os09g19820
Translocation	Chr5	14575787	Chr2	8032374
Translocation	Chr9	15900258	Chr3	26025214
Translocation	Chr4	17771619	Chr2	19422122
Translocation	Chr10	20534962	Chr9	7256751
Translocation	Chr11	22974698	Chr2	18690864
Translocation	Chr5	27467343	Chr3	35721663
Translocation	Chr4	31354317	Chr1	39587652	LOC_Os04g52680

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