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Mutant Information

Variant Information

Single base substitutions: 45

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	6819517	G-C	Homo
SBS	Chr1	27954736	G-A	HET
SBS	Chr1	41364186	C-G	Homo
SBS	Chr2	19678943	A-G	HET
SBS	Chr2	23634852	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g39130
SBS	Chr3	911669	T-C	Homo
SBS	Chr3	2343804	C-T	Homo
SBS	Chr3	2620816	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g05350
SBS	Chr3	9863238	T-C	Homo
SBS	Chr3	12166505	C-T	Homo
SBS	Chr3	18258225	C-A	HET
SBS	Chr3	18265445	G-T	HET
SBS	Chr3	22191657	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g39920
SBS	Chr3	28986788	C-T	Homo
SBS	Chr3	28986789	A-T	Homo
SBS	Chr3	34583730	G-A	HET
SBS	Chr4	8117772	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g14510
SBS	Chr4	13055386	T-A	Homo
SBS	Chr4	17411885	T-A	Homo
SBS	Chr4	24880799	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g42000
SBS	Chr5	10452183	G-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g18190
SBS	Chr5	14258169	G-A	Homo
SBS	Chr6	15066808	A-G	HET
SBS	Chr6	30300044	A-G	HET
SBS	Chr7	1065828	A-G	Homo
SBS	Chr7	1430010	G-A	HET
SBS	Chr7	1589324	C-T	HET
SBS	Chr7	27230436	C-T	HET
SBS	Chr8	7027725	A-G	HET
SBS	Chr8	21587864	A-C	HET
SBS	Chr8	22283208	G-A	Homo
SBS	Chr8	23702712	G-A	HET
SBS	Chr8	25491054	G-A	HET
SBS	Chr9	2276980	A-G	HET
SBS	Chr9	4148407	T-G	HET
SBS	Chr9	8889379	G-A	HET
SBS	Chr9	21685543	T-C	Homo
SBS	Chr10	3928438	C-G	HET
SBS	Chr10	5619500	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g10214
SBS	Chr10	11968740	C-G	HET
SBS	Chr11	2379256	G-T	Homo	STOP_GAINED	LOC_Os11g05360
SBS	Chr12	11812032	C-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g20250
SBS	Chr12	21948611	C-T	Homo
SBS	Chr12	24242495	C-T	Homo
SBS	Chr12	24409126	G-A	HET

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	2379500	2379510	10
Deletion	Chr5	2582335	2582337	2
Deletion	Chr4	3400005	3400008	3
Deletion	Chr3	8891261	8891293	32
Deletion	Chr12	13123444	13123445	1
Deletion	Chr5	13833544	13833550	6
Deletion	Chr4	26598949	26598954	5	LOC_Os04g44960
Deletion	Chr8	26716001	26748000	31999	6
Deletion	Chr4	27655960	27655970	10
Deletion	Chr1	39076227	39076231	4

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	17389628	17389629	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	26722248	27377037	2
Inversion	Chr7	26722249	27377045	2
Inversion	Chr3	30923575	30924035

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	2399395	Chr1	32064842	LOC_Os12g05334
Translocation	Chr10	3298190	Chr8	17914968
Translocation	Chr9	10534240	Chr6	25726	2
Translocation	Chr9	11307386	Chr6	22141205
Translocation	Chr7	18351900	Chr3	3505805	2
Translocation	Chr12	20981371	Chr6	23038837
Translocation	Chr7	22219160	Chr1	25421848	2
Translocation	Chr7	22219162	Chr2	10537748	2
Translocation	Chr7	22279069	Chr1	25422406	2
Translocation	Chr12	26145427	Chr11	17687373

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