Search Results

Mutant Information

Variant Information

Single base substitutions: 40

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11601	G-A	HET
SBS	Chr1	3724719	T-A	HET
SBS	Chr1	15152499	G-T	Homo
SBS	Chr1	15523308	A-G	Homo
SBS	Chr1	35753461	A-G	HET	SPLICE_SITE_ACCEPTOR	LOC_Os01g61800
SBS	Chr2	4831052	T-A	HET
SBS	Chr2	9990349	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g17370
SBS	Chr2	21673000	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os02g36050
SBS	Chr2	26492785	T-A	HET
SBS	Chr2	32424534	T-A	HET
SBS	Chr3	392728	A-G	HET
SBS	Chr3	5389037	C-G	HET
SBS	Chr3	9414397	T-C	HET
SBS	Chr3	19627580	T-A	HET
SBS	Chr3	23552634	C-T	HET
SBS	Chr3	26754264	G-A	HET
SBS	Chr4	6129991	G-A	HET
SBS	Chr4	12138846	C-A	HET
SBS	Chr4	14522459	C-A	HET
SBS	Chr4	25552161	T-A	HET
SBS	Chr5	24610320	A-G	HET
SBS	Chr5	24724013	G-C	Homo
SBS	Chr6	12445987	C-T	HET
SBS	Chr6	12445988	T-C	HET
SBS	Chr6	30087370	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g49740
SBS	Chr7	3736671	C-T	HET
SBS	Chr7	9300138	C-T	Homo
SBS	Chr7	10458333	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g17710
SBS	Chr7	20440082	C-T	HET
SBS	Chr8	9226134	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os08g15230
SBS	Chr8	15086940	T-A	Homo
SBS	Chr9	20008035	C-A	Homo
SBS	Chr10	567373	G-T	HET
SBS	Chr10	15073727	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os10g28920
SBS	Chr11	19185878	T-C	HET
SBS	Chr11	26995241	G-A	HET
SBS	Chr11	28861106	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g47850
SBS	Chr12	7171238	C-A	HET
SBS	Chr12	9932745	C-T	Homo
SBS	Chr12	27358161	C-A	HET

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	558076	558086	10
Deletion	Chr5	2099267	2099271	4	LOC_Os05g04520
Deletion	Chr3	5976602	5976605	3
Deletion	Chr7	6413994	6413999	5	LOC_Os07g11620
Deletion	Chr12	8925001	8938000	12999	3
Deletion	Chr4	9080028	9080029	1
Deletion	Chr3	9533618	9533620	2
Deletion	Chr10	9713150	9713153	3
Deletion	Chr9	9837093	9837097	4
Deletion	Chr7	10150013	10150023	10
Deletion	Chr7	11199383	11199392	9
Deletion	Chr6	12060937	12060943	6
Deletion	Chr5	16130101	16130104	3	LOC_Os05g27690
Deletion	Chr11	17143828	17143833	5	LOC_Os11g29540
Deletion	Chr1	19084133	19084134	1
Deletion	Chr10	21694940	21694941	1
Deletion	Chr5	24641967	24641972	5
Deletion	Chr4	25762321	25762322	1
Deletion	Chr3	26778379	26778380	1
Deletion	Chr2	34783945	34783949	4

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	34187575	34187576	2
Insertion	Chr4	1587270	1587272	3
Insertion	Chr8	13639761	13639761	1	LOC_Os08g22680
Insertion	Chr8	15740446	15740447	2
Insertion	Chr2	24766580	24766580	1
Insertion	Chr11	9981486	9981486	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	5975690	5996788	2
Inversion	Chr12	8937925	9932842	2
Inversion	Chr10	12718638	12754742	LOC_Os10g24730
Inversion	Chr7	26122268	26122479

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	9993652	Chr4	31328825
Translocation	Chr10	10004548	Chr4	31328820	LOC_Os10g19950
Translocation	Chr8	16452231	Chr3	5975678	2
Translocation	Chr3	18151269	Chr2	3122335
Translocation	Chr8	19209632	Chr4	4226194	3
Translocation	Chr8	19209669	Chr4	3798365

Main menu