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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10617850	C-A	Homo
SBS	Chr1	39531542	G-A	HET
SBS	Chr1	42261464	C-T	HET
SBS	Chr10	11224039	G-A	HET
SBS	Chr10	12338230	T-A	HET
SBS	Chr10	3333173	T-C	HET
SBS	Chr10	5085572	G-A	HET
SBS	Chr10	9118221	G-A	HET
SBS	Chr11	5159050	C-T	Homo
SBS	Chr11	874893	A-G	Homo
SBS	Chr12	15856422	G-T	HET
SBS	Chr12	22536710	C-G	HET
SBS	Chr12	22582398	C-T	HET
SBS	Chr2	32799699	A-G	Homo
SBS	Chr2	3438198	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g06810
SBS	Chr2	4806328	G-A	HET
SBS	Chr3	10311538	C-T	HET
SBS	Chr3	29909475	G-C	Homo
SBS	Chr4	11796855	C-T	HET
SBS	Chr4	14151688	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os04g24650
SBS	Chr4	19858874	A-G	HET
SBS	Chr5	10082451	G-C	HET
SBS	Chr5	194178	T-C	HET
SBS	Chr5	5823435	C-A	HET
SBS	Chr6	24658067	T-A	HET
SBS	Chr7	1252541	A-G	HET
SBS	Chr7	23873037	C-T	HET
SBS	Chr8	11037913	C-A	Homo	STOP_GAINED	LOC_Os08g18000

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	4279879	4279888	9
Deletion	Chr3	7336885	7336888	3
Deletion	Chr9	8155613	8155642	29
Deletion	Chr10	9936401	9936403	2
Deletion	Chr3	10005170	10005174	4
Deletion	Chr1	10386001	10407000	20999	4
Deletion	Chr12	10714680	10714688	8	LOC_Os12g18530
Deletion	Chr9	16248229	16248230	1
Deletion	Chr10	18117875	18117876	1
Deletion	Chr4	18949396	18949397	1
Deletion	Chr1	20840615	20840800	185
Deletion	Chr1	20882056	20882057	1
Deletion	Chr1	21372504	21372517	13
Deletion	Chr2	32210861	32210873	12

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	14002198	14002198	1
Insertion	Chr10	2038423	2038423	1
Insertion	Chr11	16714835	16714836	2
Insertion	Chr3	12564474	12564475	2
Insertion	Chr4	14041242	14041242	1
Insertion	Chr4	72459	72461	3
Insertion	Chr6	12398587	12398588	2
Insertion	Chr7	19409200	19409201	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	8560891	8898411
Inversion	Chr2	8560896	8898412

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	229834	Chr11	202778	2
Translocation	Chr11	873060	Chr6	16322790	2
Translocation	Chr11	873064	Chr6	16323029	2
Translocation	Chr9	11379209	Chr6	7774338	2
Translocation	Chr12	13665882	Chr8	12016938
Translocation	Chr7	19449063	Chr1	12115016
Translocation	Chr7	19555902	Chr2	25382838	2
Translocation	Chr3	25888707	Chr1	13710852

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