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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14283487	A-T	HET
SBS	Chr1	20084612	G-A	HET
SBS	Chr1	20528350	C-T	HET
SBS	Chr1	5863604	T-C	HET
SBS	Chr10	14788834	C-T	HET
SBS	Chr10	19477388	T-C	HET
SBS	Chr10	20286772	C-A	HET
SBS	Chr10	20379573	G-A	HET
SBS	Chr11	13496214	T-A	HET
SBS	Chr11	13496215	T-A	HET
SBS	Chr11	16383868	G-A	HET
SBS	Chr11	4324782	G-A	HET
SBS	Chr12	19709509	A-G	HET
SBS	Chr12	9466377	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g16520
SBS	Chr2	12603281	T-C	Homo
SBS	Chr2	9201675	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g16190
SBS	Chr3	24413863	A-G	Homo
SBS	Chr3	27928632	G-C	Homo
SBS	Chr3	34479253	T-A	HET
SBS	Chr4	17297947	C-A	HET
SBS	Chr4	1956318	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g04200
SBS	Chr4	34460425	T-A	Homo
SBS	Chr4	34460426	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g57870
SBS	Chr4	9301907	G-A	HET
SBS	Chr5	13147934	T-G	HET
SBS	Chr5	16152503	C-T	HET
SBS	Chr6	12230462	T-G	HET
SBS	Chr7	11117986	T-C	HET
SBS	Chr7	16487466	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os07g28230
SBS	Chr7	19495222	T-A	HET
SBS	Chr7	29652622	T-C	HET
SBS	Chr8	28206431	G-A	HET
SBS	Chr8	6414532	C-T	HET

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	2647998	2648004	6	LOC_Os05g05354
Deletion	Chr4	4958227	4958531	304	LOC_Os04g09330
Deletion	Chr12	8350753	8350761	8
Deletion	Chr4	10698474	10698475	1
Deletion	Chr12	16026001	16047000	20999	4
Deletion	Chr8	17043273	17043275	2
Deletion	Chr10	17753001	17762000	8999	2
Deletion	Chr6	18388060	18388061	1
Deletion	Chr11	20530001	20574000	43999	5
Deletion	Chr3	22527157	22527164	7
Deletion	Chr12	25746976	25746982	6
Deletion	Chr8	26704437	26704439	2
Deletion	Chr1	27081001	27155000	73999	11
Deletion	Chr1	27370325	27370331	6
Deletion	Chr2	28141598	28141607	9
Deletion	Chr6	28584001	28642000	57999	9
Deletion	Chr6	28833001	28854000	20999	4
Deletion	Chr6	29719001	29734000	14999	3
Deletion	Chr1	38871188	38871189	1

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	10453742	10453751	10
Insertion	Chr2	3837985	3837988	4
Insertion	Chr6	24860355	24860355	1
Insertion	Chr7	14003716	14003719	4

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	14574059	14579607
Inversion	Chr11	20442978	20528781	2
Inversion	Chr1	27081352	27236576	2
Inversion	Chr6	28588031	29221742	LOC_Os06g47150

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	9576707	Chr6	28832607	2
Translocation	Chr9	9576708	Chr6	28832857	2
Translocation	Chr6	9750364	Chr5	5212204	2
Translocation	Chr11	14431665	Chr4	13241674
Translocation	Chr7	26039047	Chr1	27236594	2
Translocation	Chr7	26039746	Chr1	27154910	LOC_Os07g43530
Translocation	Chr7	27333766	Chr3	8528708

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