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Mutant Information

Variant Information

Single base substitutions: 38

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10032051	C-A	Homo
SBS	Chr1	13365	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g01030
SBS	Chr1	24976631	C-T	HET
SBS	Chr1	26696404	C-T	HET
SBS	Chr1	32595864	C-T	Homo
SBS	Chr11	2677973	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g05790
SBS	Chr11	462741	A-G	HET
SBS	Chr12	27468556	A-T	HET
SBS	Chr2	12437428	A-T	HET
SBS	Chr2	19622341	G-A	HET
SBS	Chr2	29178083	A-G	HET
SBS	Chr2	6995124	C-T	HET
SBS	Chr3	10258547	C-T	HET
SBS	Chr3	14963765	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g26120
SBS	Chr3	151486	G-C	Homo
SBS	Chr3	18939543	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g33100
SBS	Chr3	27308884	C-T	HET
SBS	Chr3	29924453	C-T	Homo
SBS	Chr3	30215260	T-C	Homo
SBS	Chr3	4245466	G-T	Homo
SBS	Chr3	6797865	C-T	HET
SBS	Chr4	1387653	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g03250
SBS	Chr4	17091062	G-T	HET
SBS	Chr4	20353520	A-G	Homo
SBS	Chr4	5218008	C-G	Homo
SBS	Chr5	17273523	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g29850
SBS	Chr5	1848884	G-C	Homo
SBS	Chr5	22054368	C-T	HET
SBS	Chr5	22627269	A-G	HET
SBS	Chr5	2494267	C-A	Homo
SBS	Chr5	27284816	A-G	HET
SBS	Chr7	20355233	T-A	HET
SBS	Chr7	7023146	C-T	HET
SBS	Chr8	12323234	G-T	HET
SBS	Chr8	22318547	G-T	HET
SBS	Chr8	3429022	A-G	HET
SBS	Chr8	6894791	C-T	HET
SBS	Chr9	8350590	A-G	HET

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	5603717	5603718	1	LOC_Os05g10270
Deletion	Chr9	5932773	5932857	84
Deletion	Chr4	6073136	6073137	1	LOC_Os04g11170
Deletion	Chr5	9017197	9017209	12	LOC_Os05g15970
Deletion	Chr8	10480847	10480849	2
Deletion	Chr4	12044103	12044107	4
Deletion	Chr4	16530096	16530102	6
Deletion	Chr12	17003975	17003977	2
Deletion	Chr5	17176458	17176464	6	LOC_Os05g29710
Deletion	Chr7	21019633	21019634	1
Deletion	Chr3	21723983	21723984	1
Deletion	Chr2	23394888	23394889	1
Deletion	Chr11	28996462	28996474	12	LOC_Os11g48090
Deletion	Chr1	32235336	32235342	6

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	13734473	13734475	3
Insertion	Chr11	27373666	27373669	4
Insertion	Chr11	7848733	7848733	1
Insertion	Chr12	16305064	16305064	1
Insertion	Chr2	30600305	30600305	1
Insertion	Chr2	7040501	7040501	1	LOC_Os02g13210
Insertion	Chr3	14316094	14316095	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	15173977	15296481	2
Inversion	Chr12	15173978	15296635	2

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	9712766	Chr3	16768797
Translocation	Chr11	19930910	Chr8	19933686
Translocation	Chr9	20408203	Chr3	5235471
Translocation	Chr10	22790118	Chr9	8298734	LOC_Os10g42340
Translocation	Chr4	25429703	Chr3	25384770

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