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Mutant Information

Variant Information

Single base substitutions: 37

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	17539141	G-A	HET
SBS	Chr1	21901502	A-G	HET
SBS	Chr1	26681075	G-T	HET
SBS	Chr1	28698827	A-T	HET
SBS	Chr1	37328472	G-A	HET
SBS	Chr1	38722137	G-T	HET
SBS	Chr10	20074557	A-T	Homo
SBS	Chr11	10528863	A-G	HET
SBS	Chr12	14823833	C-G	HET
SBS	Chr12	21476143	C-A	HET
SBS	Chr12	8917935	C-T	HET
SBS	Chr2	8936276	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os02g15810
SBS	Chr2	8961789	A-T	HET
SBS	Chr3	12721304	G-A	HET
SBS	Chr4	16992374	G-T	HET
SBS	Chr4	18625107	C-G	HET
SBS	Chr4	23265532	C-T	HET
SBS	Chr4	28615277	G-A	Homo
SBS	Chr5	12097871	G-A	HET
SBS	Chr5	16546060	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g28260
SBS	Chr5	1804339	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os05g04020
SBS	Chr5	23761654	C-A	HET
SBS	Chr5	24083787	G-T	HET	SPLICE_SITE_DONOR	LOC_Os05g41120
SBS	Chr5	24133504	A-C	HET
SBS	Chr5	27015878	A-G	HET
SBS	Chr5	4422135	C-T	HET
SBS	Chr5	687188	T-A	HET
SBS	Chr6	153959	C-T	HET
SBS	Chr6	8186166	G-A	HET
SBS	Chr6	9673162	A-G	HET
SBS	Chr7	5613518	T-A	HET
SBS	Chr7	9635403	C-A	HET
SBS	Chr8	15500489	G-T	Homo
SBS	Chr8	1791463	G-T	Homo
SBS	Chr8	24998472	C-T	HET
SBS	Chr8	27156031	G-T	HET
SBS	Chr8	9948747	G-A	HET

Deletions: 26

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	1938415	1938466	51
Deletion	Chr7	3810113	3810114	1
Deletion	Chr1	5822808	5822822	14
Deletion	Chr10	8137646	8137647	1
Deletion	Chr12	9829741	9829743	2
Deletion	Chr1	10178376	10178503	127
Deletion	Chr8	10761959	10761962	3
Deletion	Chr9	12516792	12516809	17
Deletion	Chr1	13181308	13181325	17
Deletion	Chr12	13778001	13796000	17999	3
Deletion	Chr8	14144239	14144241	2	LOC_Os08g23400
Deletion	Chr10	14374635	14374641	6
Deletion	Chr10	15485829	15485831	2
Deletion	Chr12	16186821	16186822	1
Deletion	Chr11	16809509	16809572	63
Deletion	Chr6	18388060	18388061	1
Deletion	Chr3	19567719	19568029	310
Deletion	Chr11	20236026	20236027	1
Deletion	Chr12	20240099	20240100	1
Deletion	Chr12	21110106	21110108	2
Deletion	Chr2	22191428	22191432	4
Deletion	Chr6	23070820	23070822	2
Deletion	Chr8	26530549	26530558	9
Deletion	Chr5	29711695	29711697	2
Deletion	Chr2	30708001	30754000	45999	6
Deletion	Chr1	34591210	34591211	1

Insertions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	15948543	15948546	4
Insertion	Chr10	5956549	5956549	1
Insertion	Chr11	21536940	21536940	1
Insertion	Chr11	27287733	27287734	2
Insertion	Chr12	10366287	10366287	1
Insertion	Chr12	18817390	18817390	1
Insertion	Chr2	13638348	13638348	1
Insertion	Chr2	34491774	34491796	23
Insertion	Chr2	35655369	35655369	1	LOC_Os02g58240
Insertion	Chr4	12566401	12566403	3
Insertion	Chr4	3934456	3934456	1
Insertion	Chr4	4697248	4697271	24
Insertion	Chr6	10672860	10672860	1
Insertion	Chr6	18659202	18659202	1
Insertion	Chr6	3819118	3819118	1	LOC_Os06g07850
Insertion	Chr7	9761582	9761582	1
Insertion	Chr9	4160493	4160518	26

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	14321834	14959856

Translocations: 17

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	581708	Chr9	19096993
Translocation	Chr6	2255805	Chr2	29229629	LOC_Os06g05100
Translocation	Chr6	2256953	Chr2	29229642	LOC_Os06g05110
Translocation	Chr11	2304130	Chr3	18691207	2
Translocation	Chr9	2731213	Chr7	13894926	2
Translocation	Chr8	4935345	Chr2	23342750	2
Translocation	Chr8	6068205	Chr1	2903312	2
Translocation	Chr10	6118094	Chr2	28929019	2
Translocation	Chr12	6808508	Chr11	13095563
Translocation	Chr5	8208423	Chr1	949290	2
Translocation	Chr7	8964219	Chr2	24244989
Translocation	Chr9	11517109	Chr7	9276160	LOC_Os09g19270
Translocation	Chr9	12257974	Chr1	3225357	2
Translocation	Chr8	16458612	Chr2	10833927
Translocation	Chr8	16788590	Chr2	14478920
Translocation	Chr8	26305465	Chr1	19807167
Translocation	Chr11	27701516	Chr4	33337464	LOC_Os11g45780

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