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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	20175887	C-T	Homo
SBS	Chr11	16292630	A-T	HET
SBS	Chr11	8018573	C-T	HET
SBS	Chr11	8018577	A-T	HET
SBS	Chr11	9842739	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g17640
SBS	Chr12	14639308	T-C	Homo
SBS	Chr12	23326292	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g37970
SBS	Chr12	26809832	G-A	HET
SBS	Chr2	17653375	C-T	HET
SBS	Chr2	22535913	G-A	HET
SBS	Chr3	15298735	C-T	HET
SBS	Chr3	15794014	T-A	HET
SBS	Chr3	23990720	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g43010
SBS	Chr3	25608671	C-T	HET
SBS	Chr3	7288585	T-C	HET
SBS	Chr4	13581606	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g23739
SBS	Chr4	6061762	G-T	Homo
SBS	Chr5	12574477	G-A	HET
SBS	Chr5	24693868	G-A	Homo
SBS	Chr5	2775830	C-T	HET
SBS	Chr6	2127966	G-A	HET
SBS	Chr6	29470885	T-A	HET
SBS	Chr7	15181954	C-T	Homo
SBS	Chr7	8655291	A-T	HET
SBS	Chr7	9052230	G-A	HET
SBS	Chr8	10831217	G-A	HET
SBS	Chr8	16622839	A-T	Homo
SBS	Chr8	17215549	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g28214
SBS	Chr8	21098486	G-T	HET
SBS	Chr9	13386991	A-C	Homo
SBS	Chr9	4600868	C-T	Homo

Deletions: 4

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	9263574	9263576	2
Deletion	Chr8	11836200	11836201	1
Deletion	Chr10	19222783	19222784	1
Deletion	Chr3	35749001	35775000	25999	4

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	15748933	15748933	1
Insertion	Chr1	25435571	25435581	11
Insertion	Chr10	19490524	19490525	2
Insertion	Chr4	33911351	33911351	1
Insertion	Chr6	16242922	16242922	1
Insertion	Chr8	16304682	16304682	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	17434341	17567040	LOC_Os09g28670
Inversion	Chr9	17434352	17567045	LOC_Os09g28670

Translocations: 26

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	947778	Chr3	3191047
Translocation	Chr4	4390204	Chr3	35773789	2
Translocation	Chr4	4421146	Chr3	35747844	2
Translocation	Chr4	4808984	Chr1	24525239
Translocation	Chr7	7884095	Chr2	30181065	2
Translocation	Chr8	10034549	Chr1	17844084
Translocation	Chr12	10628773	Chr6	17675288	LOC_Os12g18374
Translocation	Chr12	12144257	Chr5	5504768	2
Translocation	Chr11	13025846	Chr3	17126159
Translocation	Chr4	15519059	Chr2	22225444
Translocation	Chr8	15935204	Chr7	6242528
Translocation	Chr6	16341911	Chr4	16071263
Translocation	Chr4	17332229	Chr3	16471215	LOC_Os04g29224
Translocation	Chr6	17593257	Chr2	2526865
Translocation	Chr8	18117580	Chr7	10902111	2
Translocation	Chr10	18196940	Chr2	15305518	2
Translocation	Chr5	19193598	Chr4	11717491
Translocation	Chr8	19389189	Chr7	13116047	2
Translocation	Chr7	19449346	Chr1	12114911
Translocation	Chr11	19693297	Chr2	5291453
Translocation	Chr8	19768614	Chr7	2440035
Translocation	Chr9	19929206	Chr4	26648747	2
Translocation	Chr12	22863224	Chr11	16443497	2
Translocation	Chr12	23131699	Chr7	4748777
Translocation	Chr11	27311390	Chr4	20036672
Translocation	Chr11	27831690	Chr7	3937360	LOC_Os11g45990

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