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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	3659418	A-G	HET
SBS	Chr1	16696374	G-A	HET
SBS	Chr1	25237557	G-A	HET
SBS	Chr1	36839076	C-T	HET
SBS	Chr2	9382783	G-C	HET
SBS	Chr2	17300614	G-A	Homo
SBS	Chr2	17300615	G-A	Homo
SBS	Chr2	17367130	A-G	HET
SBS	Chr2	24893085	C-A	HET
SBS	Chr2	33518250	C-A	HET
SBS	Chr3	1749979	T-C	HET
SBS	Chr3	27638087	T-C	HET
SBS	Chr3	32367271	G-A	HET
SBS	Chr3	33425565	C-T	HET
SBS	Chr4	1584751	C-T	HET
SBS	Chr5	20826319	T-A	Homo
SBS	Chr5	27200736	T-C	Homo
SBS	Chr6	15500072	C-T	HET
SBS	Chr6	21437540	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g36500
SBS	Chr6	26728227	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g44290
SBS	Chr8	22405323	T-A	HET
SBS	Chr8	23156725	G-A	HET
SBS	Chr10	9641120	T-A	HET
SBS	Chr10	14813865	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g28470
SBS	Chr10	18124939	C-T	HET
SBS	Chr11	7868216	G-A	Homo
SBS	Chr12	7897516	A-T	HET

Deletions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	10367926	10367937	11
Deletion	Chr4	13978586	13978593	7	LOC_Os04g24370
Deletion	Chr4	15002607	15002608	1
Deletion	Chr5	17701486	17701487	1	LOC_Os05g30550
Deletion	Chr5	25592564	25592570	6	LOC_Os05g43990
Deletion	Chr3	35032123	35032125	2
Deletion	Chr3	35622536	35622539	3	LOC_Os03g63000

Insertions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	12784947	12784947	1
Insertion	Chr3	11315495	11315495	1	LOC_Os03g20080
Insertion	Chr6	9789044	9789044	1
Insertion	Chr8	16898110	16898157	48
Insertion	Chr9	4081073	4081073	1
Insertion	Chr10	2477997	2478033	37
Insertion	Chr10	5746056	5746056	1
Insertion	Chr10	7863964	7863964	1
Insertion	Chr12	17115290	17115290	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	5959093	6671246	2
Inversion	Chr4	9050644	9636437
Inversion	Chr7	22022813	22476390	2
Inversion	Chr7	22022819	22476409	2
Inversion	Chr2	31608331	31695623	2

Translocations: 21

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	1876502	Chr3	21433660	2
Translocation	Chr2	2071705	Chr1	1500245	2
Translocation	Chr7	4481616	Chr3	10238237	2
Translocation	Chr7	4483282	Chr3	10238230	2
Translocation	Chr7	4483293	Chr6	16874797
Translocation	Chr7	4495190	Chr6	16874787	LOC_Os07g08729
Translocation	Chr5	6359040	Chr4	16101627	2
Translocation	Chr11	8191485	Chr2	15956139
Translocation	Chr9	10600812	Chr4	5951184
Translocation	Chr12	10731525	Chr7	9886988
Translocation	Chr11	12631333	Chr10	4408877
Translocation	Chr11	13736291	Chr8	9517351	2
Translocation	Chr12	14086274	Chr8	10124017	2
Translocation	Chr12	14612514	Chr4	13542909
Translocation	Chr5	14982814	Chr3	18988863	2
Translocation	Chr12	16085224	Chr9	11362969	2
Translocation	Chr9	16352336	Chr7	12663645
Translocation	Chr8	18734851	Chr5	17592010
Translocation	Chr3	19056263	Chr2	31608339
Translocation	Chr3	19056917	Chr2	31695631	2
Translocation	Chr8	19451589	Chr1	16228145	LOC_Os08g31450

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