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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	8707284	A-C	HET
SBS	Chr2	3627164	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g07070
SBS	Chr2	4542426	T-G	Homo
SBS	Chr2	15119699	C-A	HET
SBS	Chr2	17555369	G-A	HET
SBS	Chr2	25177257	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g41890
SBS	Chr2	28212535	G-A	HET
SBS	Chr3	11886165	C-A	HET
SBS	Chr3	31985392	T-C	HET
SBS	Chr4	3282067	T-C	HET
SBS	Chr4	30153474	G-A	HET
SBS	Chr5	5224282	C-T	HET
SBS	Chr5	10530920	C-A	Homo
SBS	Chr5	29896192	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g52070
SBS	Chr6	11892550	G-T	HET
SBS	Chr6	14384055	G-A	HET
SBS	Chr6	15823100	A-T	HET
SBS	Chr6	16720994	G-C	HET
SBS	Chr7	11955564	T-C	HET
SBS	Chr7	17427690	A-C	HET
SBS	Chr7	18259083	T-C	HET
SBS	Chr7	22318796	T-A	Homo
SBS	Chr8	16130328	G-T	HET
SBS	Chr8	25539838	C-T	HET
SBS	Chr9	388929	G-A	HET
SBS	Chr11	13605380	C-T	HET
SBS	Chr12	3852438	G-A	HET
SBS	Chr12	22910332	G-A	HET
SBS	Chr12	23536198	G-A	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	5684164	5684165	1
Deletion	Chr1	6372374	6372375	1
Deletion	Chr4	7738367	7738369	2
Deletion	Chr12	7745001	7802000	56999	7
Deletion	Chr5	8055864	8055865	1	LOC_Os05g14320
Deletion	Chr7	11222425	11222426	1
Deletion	Chr12	11911824	11911825	1
Deletion	Chr4	12618763	12618764	1
Deletion	Chr2	13636210	13636252	42
Deletion	Chr9	13751090	13751091	1
Deletion	Chr11	14592669	14592670	1
Deletion	Chr12	18230900	18230901	1	LOC_Os12g30360
Deletion	Chr5	24224545	24224546	1	LOC_Os05g41350
Deletion	Chr2	26313710	26313715	5
Deletion	Chr1	36614284	36614288	4

Insertions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	2207966	2208004	39
Insertion	Chr1	21829693	21829713	21
Insertion	Chr2	13709743	13709743	1	LOC_Os02g23820
Insertion	Chr3	8317499	8317499	1
Insertion	Chr4	10516215	10516215	1	LOC_Os04g18910
Insertion	Chr4	20378036	20378112	77
Insertion	Chr5	9850835	9850835	1
Insertion	Chr6	26111618	26111618	1	LOC_Os06g43450
Insertion	Chr8	12052178	12052178	1
Insertion	Chr8	13064848	13064855	8
Insertion	Chr11	21228561	21228561	1

Inversions: 7

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	11983406	11989662
Inversion	Chr1	16852135	16879233
Inversion	Chr6	22483125	22521343
Inversion	Chr8	27964167	28126771	LOC_Os08g44450
Inversion	Chr8	27964175	28126775	LOC_Os08g44450
Inversion	Chr4	33952347	34673786	2
Inversion	Chr4	33952351	34673813	2

Translocations: 27

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	1875814	Chr3	21432729	2
Translocation	Chr7	4604538	Chr1	7703252
Translocation	Chr8	5035116	Chr2	186003	LOC_Os08g08700
Translocation	Chr3	5698974	Chr1	2830033	2
Translocation	Chr8	6074788	Chr5	8208432	2
Translocation	Chr5	6452220	Chr2	6052135	LOC_Os05g11414
Translocation	Chr11	7078587	Chr5	18623416	LOC_Os11g12600
Translocation	Chr10	7704257	Chr8	18415246	2
Translocation	Chr12	8006699	Chr1	11768768
Translocation	Chr12	10840311	Chr3	8991689
Translocation	Chr12	11111154	Chr4	13426557	LOC_Os12g19140
Translocation	Chr12	13048909	Chr1	8936946
Translocation	Chr8	16263154	Chr6	15882910	2
Translocation	Chr9	16540002	Chr6	17497732	2
Translocation	Chr11	16695588	Chr6	25380995	2
Translocation	Chr11	17927741	Chr8	6185937
Translocation	Chr9	19615006	Chr8	15570691	LOC_Os09g32910
Translocation	Chr11	20942528	Chr8	11346732	LOC_Os11g35710
Translocation	Chr11	21177919	Chr2	15722690
Translocation	Chr11	22131106	Chr6	15401527	LOC_Os11g37480
Translocation	Chr12	24341703	Chr10	14037936
Translocation	Chr11	24452375	Chr9	8884818
Translocation	Chr12	24575513	Chr3	18534145
Translocation	Chr11	24642785	Chr4	18534758	LOC_Os11g41130
Translocation	Chr3	25386582	Chr1	15783907
Translocation	Chr8	28412686	Chr1	21301284
Translocation	Chr11	28452627	Chr4	22510422	LOC_Os11g47310

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