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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	1109478	C-A	HET	INTERGENIC
SBS	Chr1	1923156	C-A	HET	INTERGENIC
SBS	Chr1	18180292	A-G	HET	INTERGENIC
SBS	Chr2	7638664	A-G	HET	INTERGENIC
SBS	Chr2	24889812	G-A	HET	INTERGENIC
SBS	Chr2	35248493	G-T	HET	INTERGENIC
SBS	Chr3	16710471	C-A	HET	INTERGENIC
SBS	Chr3	17052251	C-T	HET	INTERGENIC
SBS	Chr3	19272396	G-A	HET	INTERGENIC
SBS	Chr3	21594937	C-T	HET	INTERGENIC
SBS	Chr4	1721867	C-T	HET	INTERGENIC
SBS	Chr4	4039187	T-C	HOMO	INTERGENIC
SBS	Chr4	12516673	C-T	HET	INTERGENIC
SBS	Chr4	26220439	G-A	HET	INTERGENIC
SBS	Chr4	29226186	C-T	HET	INTRON
SBS	Chr4	33956555	A-G	HET	INTERGENIC
SBS	Chr5	7068618	G-A	HET	INTERGENIC
SBS	Chr6	9662534	A-G	HET	INTERGENIC
SBS	Chr6	29162660	G-A	HET	INTERGENIC
SBS	Chr7	17616886	G-A	HET	INTERGENIC
SBS	Chr7	28006899	T-A	HET	INTERGENIC
SBS	Chr9	3151937	G-A	HET	INTERGENIC
SBS	Chr9	13536829	T-C	HET	INTERGENIC
SBS	Chr10	1590759	C-T	HET	INTERGENIC
SBS	Chr10	21063884	C-T	HET	INTERGENIC
SBS	Chr11	220171	C-T	HET	INTERGENIC
SBS	Chr11	8216832	G-C	HET	INTRON
SBS	Chr11	9572729	T-A	HET	INTERGENIC

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	1987583	1987585	2
Deletion	Chr5	2040943	2040944	1
Deletion	Chr5	2274830	2274831	1
Deletion	Chr4	5195387	5195390	3
Deletion	Chr2	9300881	9300902	21
Deletion	Chr10	10274083	10274084	1	LOC_Os10g20430
Deletion	Chr9	13940001	13983000	42999	7
Deletion	Chr7	17632100	17632179	79
Deletion	Chr9	19634763	19634766	3
Deletion	Chr5	20481001	20640000	158999	25
Deletion	Chr5	20645001	20966000	320999	50
Deletion	Chr5	20977001	21219000	241999	37
Deletion	Chr5	21291001	21448000	156999	28
Deletion	Chr5	21422062	21422064	2
Deletion	Chr5	21450001	21622000	171999	35
Deletion	Chr5	21636001	21659000	22999	4
Deletion	Chr2	21652313	21652314	1
Deletion	Chr3	22923257	22923258	1
Deletion	Chr3	33116141	33116142	1

Insertions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	27281924	27281933	10
Insertion	Chr4	3665455	3665455	1
Insertion	Chr4	10817734	10817734	1
Insertion	Chr4	28151652	28151669	18
Insertion	Chr5	12076349	12076350	2
Insertion	Chr5	20644144	20644144	1
Insertion	Chr6	18681970	18682043	74	LOC_Os06g32100
Insertion	Chr8	5168015	5168022	8
Insertion	Chr8	22688445	22688452	8
Insertion	Chr9	18970946	18970981	36
Insertion	Chr12	5188943	5188956	14
Insertion	Chr12	18435672	18435672	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	5934241	6421517
Inversion	Chr7	5952477	6006817
Inversion	Chr7	5952486	6006823
Inversion	Chr8	17494687	17620102	LOC_Os08g28630
Inversion	Chr8	17494691	17620105	LOC_Os08g28630

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	11116525	Chr9	1609908
Translocation	Chr12	19376808	Chr1	13934733	LOC_Os01g24764
Translocation	Chr8	19774183	Chr5	12662748
Translocation	Chr10	21072678	Chr5	21708691	LOC_Os05g37150
Translocation	Chr10	21072682	Chr5	21709771	LOC_Os05g37150
Translocation	Chr7	22897492	Chr3	11855839

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